Literature DB >> 26090196

Crystal structure of p-toluene-sulfonyl-methyl isocyanide.

Huma Bano1, Sammer Yousuf1.   

Abstract

The mol-ecule of the commercially available title compound, C9H9NO2S, has crystallographically imposed mirror symmetry, the mirror plane passing through the isocyanide group and the para-C atoms, the methyl C atom and the S atom of the methyl 4-tolyl sulfone moiety. In the crystal, C-H⋯O hydrogen-bond inter-actions link the mol-ecules into chains running parallel to the b axis.

Entities:  

Keywords:  crystal structure; hydrogen bonding; isocyanide derivative

Year:  2015        PMID: 26090196      PMCID: PMC4459310          DOI: 10.1107/S2056989015008816

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

The title compound is an isocyanide derivative of methyl 4-tolyl sulfone (Ye, 2007 ▸), an important reaction inter­mediate obtained during the synthesis of mesotrione, a well known herbicide (Smith et al., 2008 ▸).

Experimental

Crystal data

C9H9NO2S M = 195.23 Orthorhombic, a = 22.342 (5) Å b = 8.881 (2) Å c = 4.8462 (12) Å V = 961.6 (4) Å3 Z = 4 Mo Kα radiation μ = 0.30 mm−1 T = 273 K 0.49 × 0.32 × 0.15 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▸) T min = 0.864, T max = 0.961 5160 measured reflections 955 independent reflections 733 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.119 S = 1.11 955 reflections 77 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.39 e Å−3 Δρmin = −0.19 e Å−3

Data collection: SMART (Bruker, 2000 ▸); cell refinement: SAINT (Bruker, 2000 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▸); molecular graphics: SHELXTL (Sheldrick, 2008 ▸); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995 ▸) and PLATON (Spek, 2009 ▸). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015008816/rz5158sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015008816/rz5158Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015008816/rz5158Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015008816/rz5158fig1.tif The mol­ecular structure of title compound with displacement ellipsoids drawn at the 30% probability level. Click here for additional data file. b via . DOI: 10.1107/S2056989015008816/rz5158fig2.tif Crystal packing of the title compound, showing the formation of chains parallel to the b axis via C—H⋯O hydrogen bonds (dashed lines). H atoms not involved in hydrogen bonding are omitted. CCDC reference: 1063415 Additional supporting information: crystallographic information; 3D view; checkCIF report
C9H9NO2SF(000) = 408
Mr = 195.23Dx = 1.349 Mg m3
Orthorhombic, PnmaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2nCell parameters from 830 reflections
a = 22.342 (5) Åθ = 2.9–22.3°
b = 8.881 (2) ŵ = 0.30 mm1
c = 4.8462 (12) ÅT = 273 K
V = 961.6 (4) Å3Plate, colourless
Z = 40.49 × 0.32 × 0.15 mm
Bruker SMART APEX CCD area-detector diffractometer955 independent reflections
Radiation source: fine-focus sealed tube733 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.044
ω scanθmax = 25.5°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −27→25
Tmin = 0.864, Tmax = 0.961k = −10→10
5160 measured reflectionsl = −5→5
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H atoms treated by a mixture of independent and constrained refinement
S = 1.11w = 1/[σ2(Fo2) + (0.0557P)2 + 0.1844P] where P = (Fo2 + 2Fc2)/3
955 reflections(Δ/σ)max < 0.001
77 parametersΔρmax = 0.39 e Å3
1 restraintΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
S10.28836 (4)0.25000.85946 (16)0.0354 (3)
O10.28301 (8)0.11111 (18)1.0084 (3)0.0462 (5)
N10.17475 (16)0.25000.7198 (6)0.0483 (8)
C10.35416 (16)0.25000.6642 (7)0.0379 (9)
C20.37872 (13)0.1154 (3)0.5815 (6)0.0488 (7)
H2A0.36240.02460.63980.059*
C30.42793 (13)0.1177 (3)0.4109 (6)0.0557 (8)
H3A0.44460.02680.35430.067*
C40.45334 (18)0.25000.3212 (7)0.0477 (10)
C50.5064 (2)0.25000.1335 (11)0.0714 (16)
H5B0.505 (2)0.320 (5)0.013 (11)0.14 (2)*
C60.23235 (16)0.25000.5941 (7)0.0383 (9)
H6A0.23690.33850.47880.046*0.50
H6B0.23690.16150.47880.046*0.50
C70.1292 (2)0.25000.8320 (11)0.0707 (14)
H5A0.549 (2)0.25000.242 (17)0.21 (4)*
U11U22U33U12U13U23
S10.0508 (6)0.0300 (5)0.0255 (4)0.0000.0031 (4)0.000
O10.0676 (13)0.0360 (10)0.0349 (10)0.0001 (9)0.0045 (9)0.0096 (7)
N10.051 (2)0.0469 (19)0.0467 (18)0.0000.0048 (17)0.000
C10.044 (2)0.0368 (19)0.0330 (18)0.000−0.0023 (16)0.000
C20.0551 (18)0.0383 (15)0.0531 (15)−0.0007 (13)0.0084 (14)−0.0045 (12)
C30.0549 (19)0.0551 (18)0.0572 (18)0.0105 (15)0.0053 (15)−0.0108 (15)
C40.040 (2)0.065 (3)0.039 (2)0.000−0.0021 (17)0.000
C50.055 (3)0.104 (5)0.056 (3)0.0000.012 (3)0.000
C60.051 (2)0.0355 (18)0.0288 (17)0.0000.0018 (16)0.000
C70.066 (3)0.059 (3)0.087 (4)0.0000.008 (3)0.000
S1—O1i1.4340 (16)C2—H2A0.9300
S1—O11.4341 (16)C3—C41.375 (4)
S1—C11.748 (4)C3—H3A0.9300
S1—C61.794 (4)C4—C3i1.375 (4)
N1—C71.154 (5)C4—C51.494 (6)
N1—C61.424 (5)C5—H5B0.85 (5)
C1—C2i1.375 (3)C5—H5A1.095 (10)
C1—C21.375 (3)C6—H6A0.9700
C2—C31.376 (4)C6—H6B0.9700
O1i—S1—O1118.66 (14)C4—C3—H3A118.9
O1i—S1—C1110.03 (9)C2—C3—H3A118.9
O1—S1—C1110.03 (9)C3—C4—C3i117.3 (4)
O1i—S1—C6107.61 (10)C3—C4—C5121.33 (18)
O1—S1—C6107.61 (10)C3i—C4—C5121.33 (18)
C1—S1—C6101.45 (16)C4—C5—H5B113 (3)
C7—N1—C6177.2 (4)C4—C5—H5A114 (5)
C2i—C1—C2120.8 (3)H5B—C5—H5A111 (4)
C2i—C1—S1119.56 (18)N1—C6—S1108.9 (2)
C2—C1—S1119.56 (18)N1—C6—H6A109.9
C1—C2—C3118.8 (3)S1—C6—H6A109.9
C1—C2—H2A120.6N1—C6—H6B109.9
C3—C2—H2A120.6S1—C6—H6B109.9
C4—C3—C2122.2 (3)H6A—C6—H6B108.3
O1i—S1—C1—C2i−25.6 (3)S1—C1—C2—C3175.2 (2)
O1—S1—C1—C2i−158.2 (2)C1—C2—C3—C40.2 (5)
C6—S1—C1—C2i88.1 (3)C2—C3—C4—C3i0.6 (6)
O1i—S1—C1—C2158.2 (2)C2—C3—C4—C5−179.3 (4)
O1—S1—C1—C225.6 (3)O1i—S1—C6—N1−64.47 (9)
C6—S1—C1—C2−88.1 (3)O1—S1—C6—N164.47 (9)
C2i—C1—C2—C3−0.9 (6)C1—S1—C6—N1180.0
D—H···AD—HH···AD···AD—H···A
C6—H6A···O1ii0.972.473.2519 (18)138
C6—H6A···O1iii0.972.543.296 (4)135
C6—H6B···O1iv0.972.543.296 (4)135
C6—H6B···O1v0.972.473.2519 (18)138
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C6H6AO1i 0.972.473.2519(18)138
C6H6AO1ii 0.972.543.296(4)135
C6H6BO1iii 0.972.543.296(4)135
C6H6BO1iv 0.972.473.2519(18)138

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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