| Literature DB >> 26090180 |
Alexandre C Silvino1, Juliana M Torres1.
Abstract
The whole molecule of the title compound, C22H28N2, (I), is generated by inversion symmetry. The mol-ecule is rather similar to that of 2,3-bis-[(2-tert-butyl-phen-yl)imino]-butane, (II), a di-imine ligand comprising similar structural features [Ferreira et al. (2006 ▶). Acta Cryst. E62, o4282-o4284]. Both ligands crystallize with the -N=C(R)-C(R)=N- group around an inversion centre, in a trans configuration. Comparing the two structures, it may be noted that the independent planar groups in both mol-ecules [the central link, -N=C(R)-C(R)=N-, and the terminal aromatic ring] subtend an angle of 69.6 (1)° in (II) and 49.4 (2)° in (I). Ferreira and co-workers proposed that such angle deviation may be ascribed to the presence of two non-classical intra-molecular hydrogen bonds and steric factors. In fact, in (I), similar non-classical hydrogen bonds are observed, and the larger angular deviation in (II) may be assigned to the presence of methyl groups in the di-imino fragment, which can cause steric hindrance due to the presence of bulky tert-butyl substituents in the aromatic rings. The C=N bond lengths are similar in both compounds and agree with comonly accepted values.Entities:
Keywords: DNA; crystal structure; diimine; non-classical hydrogen bonds
Year: 2015 PMID: 26090180 PMCID: PMC4459346 DOI: 10.1107/S2056989015008610
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C22H28N2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 21498 reflections |
| θ = 3.6–25.4° | |
| µ = 0.06 mm−1 | |
| β = 95.22 (3)° | Plate, yellow |
| 0.3 × 0.17 × 0.07 mm | |
| Nonius KappaCCD diffractometer | 1284 reflections with |
| Horizonally mounted graphite crystal monochromator | |
| Detector resolution: 9 pixels mm-1 | θmax = 25.4°, θmin = 3.6° |
| CCD scans | |
| 21498 measured reflections | |
| 1811 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1811 reflections | Δρmax = 0.13 e Å−3 |
| 109 parameters | Δρmin = −0.15 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| N1 | 0.46712 (12) | 0.1526 (2) | 0.10801 (11) | 0.0485 (4) | |
| C1 | 0.47499 (15) | 0.0981 (3) | 0.01174 (14) | 0.0520 (5) | |
| H1 | 0.4486 | 0.1842 | −0.0442 | 0.062* | |
| C2 | 0.41192 (14) | 0.3400 (3) | 0.12810 (12) | 0.0440 (4) | |
| C3 | 0.31398 (16) | 0.3836 (3) | 0.06876 (15) | 0.0622 (6) | |
| H3 | 0.2873 | 0.292 | 0.0155 | 0.075* | |
| C4 | 0.25541 (18) | 0.5595 (4) | 0.08691 (17) | 0.0736 (7) | |
| H4 | 0.19 | 0.587 | 0.0465 | 0.088* | |
| C5 | 0.29551 (17) | 0.6930 (3) | 0.16573 (18) | 0.0694 (6) | |
| H5 | 0.2576 | 0.8134 | 0.1783 | 0.083* | |
| C6 | 0.39173 (16) | 0.6496 (3) | 0.22646 (15) | 0.0559 (5) | |
| H6 | 0.4171 | 0.7428 | 0.2795 | 0.067* | |
| C7 | 0.45274 (13) | 0.4721 (2) | 0.21188 (13) | 0.0413 (4) | |
| C8 | 0.55778 (14) | 0.4249 (3) | 0.28333 (14) | 0.0476 (4) | |
| C9 | 0.58580 (19) | 0.5962 (4) | 0.36621 (18) | 0.0777 (7) | |
| H9A | 0.5955 | 0.7244 | 0.3298 | 0.117* | |
| H9B | 0.6518 | 0.5612 | 0.409 | 0.117* | |
| H9C | 0.5276 | 0.6101 | 0.4117 | 0.117* | |
| C10 | 0.65538 (15) | 0.4063 (4) | 0.21568 (17) | 0.0701 (6) | |
| H10A | 0.6639 | 0.533 | 0.1775 | 0.105* | |
| H10B | 0.6429 | 0.295 | 0.1654 | 0.105* | |
| H10C | 0.7203 | 0.3791 | 0.2619 | 0.105* | |
| C11 | 0.54410 (18) | 0.2230 (3) | 0.34482 (16) | 0.0684 (6) | |
| H11A | 0.4834 | 0.2354 | 0.3872 | 0.103* | |
| H11B | 0.6091 | 0.1959 | 0.3909 | 0.103* | |
| H11C | 0.5313 | 0.1113 | 0.2948 | 0.103* |
| N1 | 0.0604 (9) | 0.0429 (9) | 0.0420 (8) | 0.0096 (7) | 0.0034 (7) | −0.0089 (7) |
| C1 | 0.0685 (12) | 0.0456 (10) | 0.0416 (10) | 0.0134 (9) | 0.0028 (8) | −0.0051 (8) |
| C2 | 0.0546 (10) | 0.0405 (10) | 0.0380 (9) | 0.0103 (8) | 0.0092 (7) | −0.0021 (7) |
| C3 | 0.0662 (13) | 0.0709 (14) | 0.0482 (11) | 0.0188 (11) | −0.0016 (9) | −0.0108 (10) |
| C4 | 0.0681 (14) | 0.0872 (17) | 0.0650 (13) | 0.0346 (13) | 0.0029 (11) | 0.0000 (12) |
| C5 | 0.0734 (14) | 0.0550 (13) | 0.0827 (15) | 0.0288 (11) | 0.0235 (12) | 0.0000 (11) |
| C6 | 0.0639 (12) | 0.0415 (11) | 0.0650 (12) | 0.0040 (9) | 0.0201 (10) | −0.0096 (9) |
| C7 | 0.0496 (10) | 0.0348 (9) | 0.0417 (9) | −0.0007 (8) | 0.0171 (7) | −0.0024 (7) |
| C8 | 0.0514 (10) | 0.0432 (10) | 0.0489 (10) | −0.0055 (8) | 0.0089 (8) | −0.0081 (8) |
| C9 | 0.0799 (15) | 0.0730 (15) | 0.0787 (15) | −0.0088 (12) | −0.0013 (12) | −0.0280 (12) |
| C10 | 0.0513 (11) | 0.0795 (16) | 0.0811 (15) | 0.0017 (11) | 0.0144 (10) | −0.0068 (12) |
| C11 | 0.0809 (14) | 0.0659 (14) | 0.0554 (12) | −0.0091 (12) | −0.0105 (10) | 0.0094 (10) |
| N1—C1 | 1.268 (2) | C7—C8 | 1.536 (2) |
| N1—C2 | 1.425 (2) | C8—C9 | 1.537 (2) |
| C1—H1 | 0.93 | C9—H9A | 0.96 |
| C1—C1i | 1.454 (3) | C9—H9B | 0.96 |
| C2—C3 | 1.388 (2) | C9—H9C | 0.96 |
| C2—C7 | 1.410 (2) | C8—C10 | 1.538 (2) |
| C3—C4 | 1.378 (3) | C10—H10A | 0.96 |
| C3—H3 | 0.93 | C10—H10B | 0.96 |
| C4—C5 | 1.370 (3) | C10—H10C | 0.96 |
| C5—H5 | 0.93 | C8—C11 | 1.534 (3) |
| C4—H4 | 0.93 | C11—H11A | 0.96 |
| C5—C6 | 1.379 (3) | C11—H11B | 0.96 |
| C6—C7 | 1.395 (2) | C11—H11C | 0.96 |
| C6—H6 | 0.93 | ||
| C1—N1—C2 | 118.93 (15) | C11—C8—C9 | 107.72 (16) |
| N1—C1—C1i | 120.4 (2) | C7—C8—C9 | 112.06 (15) |
| N1—C1—H1 | 119.8 | C11—C8—C10 | 109.68 (16) |
| C1i—C1—H1 | 119.8 | C7—C8—C10 | 110.83 (14) |
| C3—C2—C7 | 120.59 (16) | C9—C8—C10 | 106.81 (16) |
| C3—C2—N1 | 119.03 (15) | C8—C9—H9A | 109.5 |
| C7—C2—N1 | 120.24 (15) | C8—C9—H9B | 109.5 |
| C4—C3—C2 | 121.56 (19) | H9A—C9—H9B | 109.5 |
| C4—C3—H3 | 119.2 | C8—C9—H9C | 109.5 |
| C2—C3—H3 | 119.2 | H9A—C9—H9C | 109.5 |
| C5—C4—C3 | 118.67 (19) | H9B—C9—H9C | 109.5 |
| C5—C4—H4 | 120.7 | C8—C10—H10A | 109.5 |
| C3—C4—H4 | 120.7 | C8—C10—H10B | 109.5 |
| C4—C5—C6 | 120.33 (19) | H10A—C10—H10B | 109.5 |
| C4—C5—H5 | 119.8 | C8—C10—H10C | 109.5 |
| C6—C5—H5 | 119.8 | H10A—C10—H10C | 109.5 |
| C5—C6—C7 | 122.91 (18) | H10B—C10—H10C | 109.5 |
| C5—C6—H6 | 118.5 | C8—C11—H11A | 109.5 |
| C7—C6—H6 | 118.5 | C8—C11—H11B | 109.5 |
| C6—C7—C2 | 115.89 (16) | H11A—C11—H11B | 109.5 |
| C6—C7—C8 | 121.60 (15) | C8—C11—H11C | 109.5 |
| C2—C7—C8 | 122.51 (14) | H11A—C11—H11C | 109.5 |
| C11—C8—C7 | 109.64 (14) | H11B—C11—H11C | 109.5 |
| C2—N1—C1—C1i | −176.3 (2) | C3—C2—C7—C6 | −3.0 (2) |
| C1—N1—C2—C3 | 44.2 (2) | N1—C2—C7—C6 | −178.76 (15) |
| C1—N1—C2—C7 | −139.97 (18) | C3—C2—C7—C8 | 176.94 (17) |
| C7—C2—C3—C4 | 2.2 (3) | N1—C2—C7—C8 | 1.2 (2) |
| N1—C2—C3—C4 | 178.05 (18) | C6—C7—C8—C11 | 117.87 (18) |
| C2—C3—C4—C5 | −0.1 (3) | C2—C7—C8—C11 | −62.0 (2) |
| C3—C4—C5—C6 | −1.0 (3) | C6—C7—C8—C9 | −1.7 (2) |
| C4—C5—C6—C7 | 0.1 (3) | C2—C7—C8—C9 | 178.39 (16) |
| C5—C6—C7—C2 | 1.9 (3) | C6—C7—C8—C10 | −120.91 (18) |
| C5—C6—C7—C8 | −178.02 (17) | C2—C7—C8—C10 | 59.2 (2) |
Hydrogen-bond geometry (, )
-
| DHA | DH | HA | DA | DHA |
|---|---|---|---|---|
| C10H10 | 0.960 | 2.405(2) | 3.055(3) | 124.8(3) |
| C11H11 | 0.960 | 2.414(2) | 3.064(3) | 124.6(2) |