Literature DB >> 26090169

Crystal structure of catena-poly[[[di-aqua-cobalt(II)]-bis-(μ-hex-3-enedi-nitrile-κ(2) N:N')] bis-(tetra-fluorido-borate)].

Jung-Su Son1, Sung-Chul Lim1, Hochun Lee1, Seung-Tae Hong1.   

Abstract

In the structure of the title salt, [Co(C6H6N2)2(H2O)2](BF4)2, the Co(II) atom is located on an inversion centre. The transition metal is in a slightly distorted octa-hedral coordination environment, defined by the cyano N atoms of four hex-3-enedi-nitrile ligands in equatorial positions and the O atoms of two water mol-ecules in axial positions. The bridging mode of the hex-3-enedi-nitrile ligands leads to the formation of cationic chains extending parallel to [1-10]. The BF4 (-) counter-anion is disordered over two sets of sites [occupancy ratio = 0.512 (19):0.489 (19)]. It is located in the voids between the cationic chains and is connected to the aqua ligands of the latter through O-H⋯F hydrogen bonds. One methyl-ene H atom of the hex-3-enedi-nitrile ligand forms another and weak C-H⋯O hydrogen bond with a water O atom of a neighbouring chain, thus consolidating the three-dimensional network structure.

Entities:  

Keywords:  cobalt; crystal structure; hex-3-enedi­nitrile; hydrogen bonding

Year:  2015        PMID: 26090169      PMCID: PMC4459353          DOI: 10.1107/S2056989015009548

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

Aliphatic di­nitriles have gained much attention not only due to their rich coordination chemistry with transition-metal ions (Storhoff & Lewis, 1977 ▸; Heller & Sheldrick, 2004 ▸; Blount et al., 1969 ▸), but also due to their applications as functional electrolyte additives for lithium ion batteries (Kim et al., 2011 ▸, 2014a ▸,b ▸). While the coordination complexes of saturated aliphatic di­nitrile ligands have been extensively studied (Storhoff & Lewis, 1977 ▸; Heller & Sheldrick, 2004 ▸; Blount et al., 1969 ▸), those of unsaturated di­nitrile ligands like in the title compound have hardly been reported so far.

Experimental

Crystal data

[Co(C6H6N2)(H2O)2](BF4)2 M = 480.84 Triclinic, a = 7.9839 (11) Å b = 8.3434 (11) Å c = 8.8441 (13) Å α = 71.380 (5)° β = 88.458 (5)° γ = 66.184 (4)° V = 507.21 (12) Å3 Z = 1 Mo Kα radiation μ = 0.93 mm−1 T = 103 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2006 ▸) T min = 0.60, T max = 0.75 14705 measured reflections 2501 independent reflections 2233 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 3σ(F 2)] = 0.033 wR(F 2) = 0.068 S = 0.87 2202 reflections 170 parameters 20 restraints H-atom parameters constrained Δρmax = 0.83 e Å−3 Δρmin = −0.62 e Å−3

Data collection: APEX2 (Bruker, 2006 ▸); cell refinement: SAINT (Bruker, 2006 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▸); molecular graphics: ATOMS (Dowty, 2000 ▸); software used to prepare material for publication: CRYSTALS. Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015009548/wm5160sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015009548/wm5160Isup2.hkl Click here for additional data file. 4 − . DOI: 10.1107/S2056989015009548/wm5160fig1.tif The cationic chain structure of the title compound with displacement ellipsoids drawn at the 50% probability level. The BF4 − anion is shown only with the major part of the disorder. Click here for additional data file. 4 − . DOI: 10.1107/S2056989015009548/wm5160fig2.tif The crystal packing of the title compound with displacement ellipsoids drawn at the 50% probability level. The BF4 − anion is shown only with the major part of the disorder. (Colour code: dark blue: Co, purple: N, blue: C, red: O, cyan: B, green: F, grey: H). CCDC reference: 1401602 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Co(C6H6N2)(H2O)2](BF4)2Z = 1
Mr = 480.84F(000) = 241
Triclinic, P1Dx = 1.575 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.9839 (11) ÅCell parameters from 0 reflections
b = 8.3434 (11) Åθ = 0–0°
c = 8.8441 (13) ŵ = 0.93 mm1
α = 71.380 (5)°T = 103 K
β = 88.458 (5)°Cuboid, yellow
γ = 66.184 (4)°0.20 × 0.20 × 0.20 mm
V = 507.21 (12) Å3
Bruker APEXII CCD diffractometer2233 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.038
φ & ω scansθmax = 28.5°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2006)h = −10→10
Tmin = 0.60, Tmax = 0.75k = −11→11
14705 measured reflectionsl = −11→11
2501 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033H-atom parameters constrained
wR(F2) = 0.068Weighting scheme based on measured s.u.'s W = 1
S = 0.87(Δ/σ)max = 0.0002
2202 reflectionsΔρmax = 0.83 e Å3
170 parametersΔρmin = −0.62 e Å3
20 restraints
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles, and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Co10.00001.00000.50000.0158
N10.2687 (2)0.8866 (2)0.6299 (2)0.0199
N20.1190 (2)0.9254 (2)0.3036 (2)0.0192
C10.4140 (2)0.8397 (3)0.6904 (2)0.0179
C20.6004 (3)0.7780 (3)0.7691 (3)0.0221
C30.7036 (2)0.5683 (3)0.8382 (2)0.0200
C40.6448 (3)0.4468 (3)0.8245 (2)0.0201
C50.7535 (3)0.2388 (3)0.9045 (2)0.0244
C60.8244 (2)0.1444 (2)0.7878 (2)0.0181
O10.02105 (18)1.25018 (18)0.41358 (16)0.0197
B10.7569 (3)0.7200 (3)0.2131 (3)0.0287
F10.77132 (18)0.55820 (17)0.18696 (15)0.0295
F20.8571 (16)0.6724 (15)0.3523 (13)0.05550.512 (19)
F30.8368 (13)0.8076 (13)0.0834 (11)0.06300.512 (19)
F40.5804 (9)0.8300 (10)0.2014 (15)0.05850.512 (19)
F210.9052 (8)0.6606 (13)0.3357 (11)0.02550.489 (19)
F310.7671 (17)0.8497 (11)0.0853 (10)0.05510.489 (19)
F410.5866 (9)0.7929 (11)0.2810 (16)0.05340.489 (19)
H110.04131.29540.47710.034 (4)*
H12−0.05541.33930.34160.043 (4)*
H210.58970.82910.85290.034 (4)*
H220.66940.82930.69190.033 (4)*
H310.81740.52530.89310.034 (4)*
H410.53010.48890.76390.035 (4)*
H510.68010.18480.96800.036 (4)*
H520.85700.21890.97010.034 (4)*
U11U22U33U12U13U23
Co10.01363 (18)0.01074 (17)0.0198 (2)−0.00181 (13)−0.00123 (13)−0.00526 (14)
N10.0166 (8)0.0169 (8)0.0222 (8)−0.0025 (6)−0.0014 (6)−0.0070 (6)
N20.0170 (7)0.0163 (8)0.0211 (8)−0.0039 (6)0.0006 (6)−0.0060 (6)
C10.0173 (7)0.0138 (8)0.0201 (9)−0.0033 (7)0.0015 (7)−0.0067 (7)
C20.0153 (7)0.0209 (9)0.0292 (10)−0.0055 (7)−0.0023 (7)−0.0093 (8)
C30.0139 (7)0.0221 (9)0.0194 (9)−0.0018 (7)−0.0025 (7)−0.0081 (7)
C40.0170 (7)0.0207 (9)0.0178 (9)−0.0024 (7)0.0018 (7)−0.0076 (7)
C50.0266 (7)0.0216 (10)0.0182 (9)−0.0031 (8)0.0026 (8)−0.0074 (8)
C60.0172 (7)0.0135 (8)0.0176 (9)−0.0032 (7)−0.0023 (7)−0.0015 (7)
O10.0223 (7)0.0126 (6)0.0219 (7)−0.0052 (5)−0.0021 (5)−0.0056 (5)
B10.0252 (12)0.0159 (10)0.0380 (14)−0.0057 (9)−0.0119 (10)−0.0028 (10)
F10.0363 (7)0.0211 (6)0.0283 (7)−0.0096 (5)−0.0101 (5)−0.0067 (5)
F20.072 (4)0.036 (3)0.049 (4)−0.010 (4)−0.032 (4)−0.017 (2)
F30.046 (3)0.047 (4)0.071 (3)−0.026 (3)−0.009 (3)0.022 (3)
F40.0361 (18)0.039 (3)0.088 (5)0.0039 (18)0.000 (3)−0.031 (3)
F210.0208 (19)0.021 (2)0.032 (2)−0.0030 (16)−0.0089 (16)−0.0115 (15)
F310.072 (4)0.031 (3)0.046 (2)−0.028 (3)−0.025 (3)0.019 (2)
F410.0304 (19)0.042 (3)0.088 (5)−0.0067 (18)0.010 (3)−0.034 (3)
Co1—N1i2.1486 (17)C4—H410.946
Co1—N2i2.1050 (17)C5—C61.460 (6)
Co1—O1i2.0560 (15)C5—H510.946
Co1—N12.1486 (17)C5—H520.949
Co1—N22.1050 (17)O1—H110.821
Co1—O12.0560 (15)O1—H120.826
N1—C11.148 (6)B1—F11.401 (3)
N2—C6ii1.125 (5)B1—F21.341 (12)
C1—C21.474 (8)B1—F31.435 (11)
C2—C31.514 (9)B1—F41.320 (9)
C2—H210.953B1—F11.401 (3)
C2—H220.967B1—F211.440 (12)
C3—C41.315 (4)B1—F311.319 (11)
C3—H310.916B1—F411.450 (10)
C4—C51.516 (3)
N1i—Co1—N2i90.57 (6)C4—C3—H31118.7
N1i—Co1—O1i87.29 (6)C3—C4—C5122.3 (3)
N2i—Co1—O1i91.15 (6)C3—C4—H41119.7
N1i—Co1—N1179.995C5—C4—H41118.0
N2i—Co1—N189.4 (8)C4—C5—C6112.18 (14)
O1i—Co1—N192.7 (4)C4—C5—H51110.9
N1i—Co1—N289.4 (4)C6—C5—H51108.7
N2i—Co1—N2179.995C4—C5—H52108.2
O1i—Co1—N288.9 (6)C6—C5—H52107.0
N1—Co1—N290.57 (6)H51—C5—H52109.8
N1i—Co1—O192.7 (8)C5—C6—N2ii178.3 (2)
N2i—Co1—O188.9 (3)Co1—O1—H11119.4
O1i—Co1—O1179.994Co1—O1—H12121.0
N1—Co1—O187.29 (6)H11—O1—H12105.0
N2—Co1—O191.15 (6)F1—B1—F2109.0 (6)
Co1—N1—C1173.92 (16)F1—B1—F3105.3 (7)
Co1—N2—C6ii166.34 (18)F2—B1—F3109.1 (7)
N1—C1—C2179.5 (2)F1—B1—F4108.3 (6)
C1—C2—C3113.2 (2)F2—B1—F4115.9 (6)
C1—C2—H21108.5F3—B1—F4108.7 (6)
C3—C2—H21109.3F1—B1—F21105.8 (6)
C1—C2—H22108.7F1—B1—F31115.0 (6)
C3—C2—H22109.9F21—B1—F31109.8 (7)
H21—C2—H22107.0F1—B1—F41108.4 (6)
C2—C3—C4125.87 (19)F21—B1—F41106.8 (6)
C2—C3—H31115.5F31—B1—F41110.7 (8)
D—H···AD—HH···AD···AD—H···A
C2—H22···O1iii0.972.523.348 (3)143 (1)
O1—H12···F1iv0.831.892.72 (2)175 (1)
O1—H11···F2iii0.821.872.669 (13)163 (1)
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C2H22O1i 0.972.523.348(3)143(1)
O1H12F1ii 0.831.892.72(2)175(1)
O1H11F2i 0.821.872.669(13)163(1)

Symmetry codes: (i) ; (ii) .

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