| Literature DB >> 26090151 |
Lena Knauer1, Eva R Barth1, Christopher Golz1, Carsten Strohmann1.
Abstract
The title compound, [Ge(CH3)3(C7H5O2)], was obtained as a by-product in the synthesis of the corresponding aldehyde. Two slightly different mol-ecules are present in the asymmetric unit. In both mol-ecules, the geometry of the aromatic ring plane is distorted by varying intensities. Additionally, the Ge atoms deviate from the mean aromatic ring planes. Whereas the distance of the Ge atom to the ring plane is only 0.101 (4) Å in the first mol-ecule, this distance is increased to 0.210 (4) Å in the second. In the crystal structure, centrosymmetric O-H⋯O hydrogen-bonded dimers are formed. The title compound is isostructural with the Si analogue [Haberecht et al. (2004 ▶). Acta Cryst. E60, o329-0330].Entities:
Keywords: 4-(trimethylgermyl)benzoic acid; crystal structure; germanium; hydrogen bonding
Year: 2015 PMID: 26090151 PMCID: PMC4459299 DOI: 10.1107/S2056989015009160
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The structures and atom numbering of the two independent molecules in the title compound. Displacement ellipsoids are drawn at the 30% probability level.
Deviation of atoms from the benzene ring least-squares planes ()
| Atom | Deviation | Atom | Deviation |
|---|---|---|---|
| C2 | 0.015(2) | C12 | 0.004(2) |
| C3 | 0.007(2) | C13 | 0.003(2) |
| C4 | 0.008(2) | C14 | 0.003(2) |
| C5 | 0.015(2) | C15 | 0.007(2) |
| C6 | 0.007(2) | C16 | 0.006(2) |
| C7 | 0.007(2) | C17 | 0.000(4) |
| Ge1* | 0.210(4) | Ge2* | 0.101(4) |
Note: (*) not used in the least-squares-plane calculation.
Figure 2Illustration of the hydrogen-bonded dimers in the unit cell. Hydrogen bonds are represented as dashed lines.
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O2H2O1i | 0.93(5) | 1.71(5) | 2.626(3) | 170(5) |
| O4H4 | 0.93(5) | 1.70(5) | 2.635(3) | 179(4) |
Symmetry codes: (i) ; (ii) .
Figure 3Schematic representation of the synthesis of compound (I).
Experimental details
| Crystal data | |
| Chemical formula | [Ge(CH3)3(C7H5O2)] |
|
| 238.80 |
| Crystal system, space group | Triclinic, |
| Temperature (K) | 173 |
|
| 6.3560(4), 12.3927(6), 14.2084(7) |
| , , () | 96.348(4), 92.846(4), 93.246(4) |
|
| 1108.76(10) |
|
| 4 |
| Radiation type | Mo |
| (mm1) | 2.73 |
| Crystal size (mm) | 0.08 0.08 0.02 |
| Data collection | |
| Diffractometer | Agilent Xcalibur Sapphire3 |
| Absorption correction | Multi-scan ( |
|
| 0.794, 1.000 |
| No. of measured, independent and observed [ | 15667, 4781, 3261 |
|
| 0.044 |
| (sin /)max (1) | 0.639 |
| Refinement | |
|
| 0.036, 0.083, 1.02 |
| No. of reflections | 4781 |
| No. of parameters | 249 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| max, min (e 3) | 0.54, 0.31 |
Computer programs: CrysAlis PRO (Agilent, 2014 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸) and OLEX2 (Dolomanov et al., 2009 ▸).
| [Ge(CH3)3(C7H5O2)] | |
| Triclinic, | |
| Mo | |
| Cell parameters from 4611 reflections | |
| θ = 2.9–28.4° | |
| α = 96.348 (4)° | µ = 2.73 mm−1 |
| β = 92.846 (4)° | |
| γ = 93.246 (4)° | Plate, clear colourless |
| 0.08 × 0.08 × 0.02 mm |
| Agilent Xcalibur Sapphire3 diffractometer | 4781 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 3261 reflections with |
| Graphite monochromator | |
| Detector resolution: 16.0560 pixels mm-1 | θmax = 27.0°, θmin = 2.3° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 15667 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 4781 reflections | Δρmax = 0.54 e Å−3 |
| 249 parameters | Δρmin = −0.31 e Å−3 |
| 0 restraints |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Ge1 | 0.34904 (5) | 0.43946 (2) | 0.19617 (2) | 0.02258 (10) | |
| O1 | 0.1858 (3) | 0.90478 (18) | −0.01761 (15) | 0.0386 (6) | |
| O2 | −0.0693 (4) | 0.9178 (2) | 0.08546 (16) | 0.0369 (6) | |
| H2 | −0.124 (7) | 0.976 (4) | 0.060 (3) | 0.13 (2)* | |
| C1 | 0.0846 (5) | 0.8712 (3) | 0.0511 (2) | 0.0268 (7) | |
| C2 | 0.1569 (5) | 0.7738 (2) | 0.0910 (2) | 0.0237 (7) | |
| C3 | 0.3337 (5) | 0.7244 (3) | 0.0588 (2) | 0.0309 (8) | |
| H3 | 0.4140 | 0.7559 | 0.0131 | 0.037* | |
| C4 | 0.3942 (5) | 0.6307 (3) | 0.0920 (2) | 0.0306 (8) | |
| H4 | 0.5164 | 0.5985 | 0.0688 | 0.037* | |
| C5 | 0.2814 (4) | 0.5813 (2) | 0.1589 (2) | 0.0230 (7) | |
| C6 | 0.1072 (4) | 0.6339 (2) | 0.1931 (2) | 0.0259 (7) | |
| H6 | 0.0291 | 0.6039 | 0.2404 | 0.031* | |
| C7 | 0.0460 (5) | 0.7283 (2) | 0.1598 (2) | 0.0262 (7) | |
| H7 | −0.0732 | 0.7624 | 0.1843 | 0.031* | |
| C8 | 0.2619 (5) | 0.4263 (3) | 0.3237 (2) | 0.0355 (8) | |
| H8A | 0.3064 | 0.3576 | 0.3438 | 0.053* | |
| H8B | 0.1079 | 0.4275 | 0.3244 | 0.053* | |
| H8C | 0.3273 | 0.4872 | 0.3672 | 0.053* | |
| C9 | 0.1964 (5) | 0.3288 (3) | 0.1066 (2) | 0.0324 (8) | |
| H9A | 0.2346 | 0.3388 | 0.0421 | 0.049* | |
| H9B | 0.0442 | 0.3351 | 0.1115 | 0.049* | |
| H9C | 0.2334 | 0.2565 | 0.1213 | 0.049* | |
| C10 | 0.6506 (4) | 0.4247 (3) | 0.1914 (2) | 0.0361 (8) | |
| H10A | 0.7241 | 0.4701 | 0.2453 | 0.054* | |
| H10B | 0.6991 | 0.4480 | 0.1320 | 0.054* | |
| H10C | 0.6808 | 0.3484 | 0.1945 | 0.054* | |
| Ge2 | 0.64145 (5) | 1.05828 (3) | 0.30054 (2) | 0.02464 (10) | |
| O3 | 0.7978 (3) | 0.54301 (17) | 0.43295 (15) | 0.0338 (5) | |
| O4 | 1.0933 (4) | 0.6355 (2) | 0.49737 (16) | 0.0376 (6) | |
| H4A | 1.133 (7) | 0.573 (4) | 0.522 (3) | 0.116 (19)* | |
| C11 | 0.9143 (5) | 0.6285 (3) | 0.4488 (2) | 0.0267 (7) | |
| C12 | 0.8508 (5) | 0.7298 (3) | 0.4112 (2) | 0.0250 (7) | |
| C13 | 0.6552 (5) | 0.7320 (2) | 0.3641 (2) | 0.0276 (7) | |
| H13 | 0.5620 | 0.6686 | 0.3551 | 0.033* | |
| C14 | 0.5962 (5) | 0.8266 (2) | 0.3304 (2) | 0.0275 (7) | |
| H14 | 0.4618 | 0.8271 | 0.2981 | 0.033* | |
| C15 | 0.7279 (5) | 0.9214 (2) | 0.3421 (2) | 0.0244 (7) | |
| C16 | 0.9254 (5) | 0.9163 (3) | 0.3887 (2) | 0.0306 (8) | |
| H16 | 1.0205 | 0.9790 | 0.3968 | 0.037* | |
| C17 | 0.9849 (5) | 0.8226 (2) | 0.4229 (2) | 0.0278 (7) | |
| H17 | 1.1195 | 0.8215 | 0.4549 | 0.033* | |
| C18 | 0.4858 (5) | 1.1327 (3) | 0.4005 (2) | 0.0401 (9) | |
| H18A | 0.3884 | 1.0801 | 0.4254 | 0.060* | |
| H18B | 0.4055 | 1.1890 | 0.3746 | 0.060* | |
| H18C | 0.5851 | 1.1665 | 0.4517 | 0.060* | |
| C19 | 0.8925 (5) | 1.1465 (3) | 0.2791 (2) | 0.0383 (9) | |
| H19A | 0.9715 | 1.1690 | 0.3398 | 0.057* | |
| H19B | 0.8517 | 1.2110 | 0.2503 | 0.057* | |
| H19C | 0.9813 | 1.1039 | 0.2365 | 0.057* | |
| C20 | 0.4583 (5) | 1.0264 (3) | 0.1866 (2) | 0.0404 (9) | |
| H20A | 0.5249 | 0.9760 | 0.1408 | 0.061* | |
| H20B | 0.4346 | 1.0940 | 0.1588 | 0.061* | |
| H20C | 0.3229 | 0.9932 | 0.2024 | 0.061* |
| Ge1 | 0.02235 (19) | 0.02012 (19) | 0.02573 (19) | 0.00270 (14) | 0.00329 (14) | 0.00304 (14) |
| O1 | 0.0510 (15) | 0.0342 (14) | 0.0335 (13) | 0.0061 (12) | 0.0093 (12) | 0.0124 (11) |
| O2 | 0.0398 (14) | 0.0324 (14) | 0.0416 (14) | 0.0141 (12) | 0.0061 (12) | 0.0108 (12) |
| C1 | 0.0287 (18) | 0.0262 (19) | 0.0240 (17) | −0.0001 (14) | −0.0020 (14) | −0.0015 (14) |
| C2 | 0.0280 (17) | 0.0190 (16) | 0.0232 (16) | −0.0010 (13) | −0.0015 (13) | 0.0000 (13) |
| C3 | 0.0338 (18) | 0.033 (2) | 0.0291 (18) | 0.0054 (15) | 0.0141 (15) | 0.0104 (15) |
| C4 | 0.0319 (18) | 0.0303 (19) | 0.0329 (18) | 0.0105 (15) | 0.0142 (15) | 0.0078 (15) |
| C5 | 0.0235 (16) | 0.0242 (17) | 0.0206 (16) | −0.0005 (13) | 0.0003 (13) | 0.0012 (13) |
| C6 | 0.0297 (17) | 0.0253 (18) | 0.0240 (16) | 0.0025 (14) | 0.0102 (14) | 0.0048 (14) |
| C7 | 0.0258 (16) | 0.0241 (17) | 0.0298 (17) | 0.0061 (13) | 0.0058 (14) | 0.0042 (14) |
| C8 | 0.045 (2) | 0.0308 (19) | 0.0326 (19) | 0.0042 (16) | 0.0076 (16) | 0.0084 (15) |
| C9 | 0.0279 (18) | 0.0293 (19) | 0.0386 (19) | −0.0012 (14) | 0.0035 (15) | −0.0016 (15) |
| C10 | 0.0236 (17) | 0.039 (2) | 0.046 (2) | 0.0056 (15) | 0.0030 (15) | 0.0063 (17) |
| Ge2 | 0.02168 (19) | 0.0210 (2) | 0.0313 (2) | 0.00206 (14) | −0.00119 (14) | 0.00386 (15) |
| O3 | 0.0441 (14) | 0.0212 (12) | 0.0352 (13) | 0.0003 (11) | −0.0028 (11) | 0.0024 (10) |
| O4 | 0.0411 (15) | 0.0338 (15) | 0.0379 (14) | 0.0072 (12) | −0.0082 (11) | 0.0060 (12) |
| C11 | 0.0357 (19) | 0.0264 (19) | 0.0187 (16) | 0.0078 (15) | 0.0043 (14) | 0.0010 (14) |
| C12 | 0.0315 (18) | 0.0261 (18) | 0.0173 (15) | 0.0040 (14) | 0.0043 (13) | −0.0011 (13) |
| C13 | 0.0284 (17) | 0.0234 (17) | 0.0302 (18) | −0.0018 (14) | 0.0000 (14) | 0.0020 (14) |
| C14 | 0.0237 (17) | 0.0269 (18) | 0.0320 (18) | 0.0025 (14) | −0.0028 (14) | 0.0052 (14) |
| C15 | 0.0257 (17) | 0.0225 (17) | 0.0250 (17) | 0.0037 (13) | 0.0019 (13) | 0.0018 (14) |
| C16 | 0.0299 (18) | 0.0241 (18) | 0.0363 (19) | −0.0045 (14) | −0.0038 (15) | 0.0020 (15) |
| C17 | 0.0250 (17) | 0.0258 (18) | 0.0321 (18) | 0.0041 (14) | −0.0059 (14) | 0.0030 (14) |
| C18 | 0.035 (2) | 0.040 (2) | 0.044 (2) | 0.0114 (16) | 0.0014 (17) | −0.0034 (17) |
| C19 | 0.0310 (19) | 0.032 (2) | 0.054 (2) | −0.0012 (15) | 0.0039 (17) | 0.0172 (17) |
| C20 | 0.042 (2) | 0.040 (2) | 0.039 (2) | 0.0076 (17) | −0.0100 (17) | 0.0072 (17) |
| Ge1—C5 | 1.955 (3) | Ge2—C15 | 1.955 (3) |
| Ge1—C8 | 1.942 (3) | Ge2—C18 | 1.949 (3) |
| Ge1—C9 | 1.945 (3) | Ge2—C19 | 1.938 (3) |
| Ge1—C10 | 1.939 (3) | Ge2—C20 | 1.937 (3) |
| O1—C1 | 1.289 (3) | O3—C11 | 1.250 (4) |
| O2—H2 | 0.93 (5) | O4—H4A | 0.93 (5) |
| O2—C1 | 1.256 (3) | O4—C11 | 1.295 (4) |
| C1—C2 | 1.476 (4) | C11—C12 | 1.486 (4) |
| C2—C3 | 1.383 (4) | C12—C13 | 1.385 (4) |
| C2—C7 | 1.384 (4) | C12—C17 | 1.381 (4) |
| C3—H3 | 0.9500 | C13—H13 | 0.9500 |
| C3—C4 | 1.368 (4) | C13—C14 | 1.379 (4) |
| C4—H4 | 0.9500 | C14—H14 | 0.9500 |
| C4—C5 | 1.393 (4) | C14—C15 | 1.393 (4) |
| C5—C6 | 1.398 (4) | C15—C16 | 1.398 (4) |
| C6—H6 | 0.9500 | C16—H16 | 0.9500 |
| C6—C7 | 1.379 (4) | C16—C17 | 1.374 (4) |
| C7—H7 | 0.9500 | C17—H17 | 0.9500 |
| C8—H8A | 0.9800 | C18—H18A | 0.9800 |
| C8—H8B | 0.9800 | C18—H18B | 0.9800 |
| C8—H8C | 0.9800 | C18—H18C | 0.9800 |
| C9—H9A | 0.9800 | C19—H19A | 0.9800 |
| C9—H9B | 0.9800 | C19—H19B | 0.9800 |
| C9—H9C | 0.9800 | C19—H19C | 0.9800 |
| C10—H10A | 0.9800 | C20—H20A | 0.9800 |
| C10—H10B | 0.9800 | C20—H20B | 0.9800 |
| C10—H10C | 0.9800 | C20—H20C | 0.9800 |
| C8—Ge1—C5 | 109.93 (12) | C18—Ge2—C15 | 108.31 (13) |
| C8—Ge1—C9 | 109.99 (13) | C19—Ge2—C15 | 108.52 (13) |
| C9—Ge1—C5 | 107.50 (13) | C19—Ge2—C18 | 110.01 (15) |
| C10—Ge1—C5 | 109.30 (13) | C20—Ge2—C15 | 108.88 (13) |
| C10—Ge1—C8 | 109.89 (14) | C20—Ge2—C18 | 109.23 (14) |
| C10—Ge1—C9 | 110.19 (13) | C20—Ge2—C19 | 111.81 (15) |
| C1—O2—H2 | 122 (3) | C11—O4—H4A | 116 (3) |
| O1—C1—C2 | 117.5 (3) | O3—C11—O4 | 123.6 (3) |
| O2—C1—O1 | 123.2 (3) | O3—C11—C12 | 120.3 (3) |
| O2—C1—C2 | 119.3 (3) | O4—C11—C12 | 116.0 (3) |
| C3—C2—C1 | 120.8 (3) | C13—C12—C11 | 120.0 (3) |
| C3—C2—C7 | 118.6 (3) | C17—C12—C11 | 120.6 (3) |
| C7—C2—C1 | 120.6 (3) | C17—C12—C13 | 119.3 (3) |
| C2—C3—H3 | 119.6 | C12—C13—H13 | 120.1 |
| C4—C3—C2 | 120.8 (3) | C14—C13—C12 | 119.7 (3) |
| C4—C3—H3 | 119.6 | C14—C13—H13 | 120.1 |
| C3—C4—H4 | 119.1 | C13—C14—H14 | 119.0 |
| C3—C4—C5 | 121.7 (3) | C13—C14—C15 | 122.0 (3) |
| C5—C4—H4 | 119.1 | C15—C14—H14 | 119.0 |
| C4—C5—Ge1 | 121.8 (2) | C14—C15—Ge2 | 122.6 (2) |
| C4—C5—C6 | 116.8 (3) | C14—C15—C16 | 117.0 (3) |
| C6—C5—Ge1 | 121.2 (2) | C16—C15—Ge2 | 120.4 (2) |
| C5—C6—H6 | 119.3 | C15—C16—H16 | 119.3 |
| C7—C6—C5 | 121.5 (3) | C17—C16—C15 | 121.4 (3) |
| C7—C6—H6 | 119.3 | C17—C16—H16 | 119.3 |
| C2—C7—H7 | 119.8 | C12—C17—H17 | 119.7 |
| C6—C7—C2 | 120.4 (3) | C16—C17—C12 | 120.6 (3) |
| C6—C7—H7 | 119.8 | C16—C17—H17 | 119.7 |
| Ge1—C8—H8A | 109.5 | Ge2—C18—H18A | 109.5 |
| Ge1—C8—H8B | 109.5 | Ge2—C18—H18B | 109.5 |
| Ge1—C8—H8C | 109.5 | Ge2—C18—H18C | 109.5 |
| H8A—C8—H8B | 109.5 | H18A—C18—H18B | 109.5 |
| H8A—C8—H8C | 109.5 | H18A—C18—H18C | 109.5 |
| H8B—C8—H8C | 109.5 | H18B—C18—H18C | 109.5 |
| Ge1—C9—H9A | 109.5 | Ge2—C19—H19A | 109.5 |
| Ge1—C9—H9B | 109.5 | Ge2—C19—H19B | 109.5 |
| Ge1—C9—H9C | 109.5 | Ge2—C19—H19C | 109.5 |
| H9A—C9—H9B | 109.5 | H19A—C19—H19B | 109.5 |
| H9A—C9—H9C | 109.5 | H19A—C19—H19C | 109.5 |
| H9B—C9—H9C | 109.5 | H19B—C19—H19C | 109.5 |
| Ge1—C10—H10A | 109.5 | Ge2—C20—H20A | 109.5 |
| Ge1—C10—H10B | 109.5 | Ge2—C20—H20B | 109.5 |
| Ge1—C10—H10C | 109.5 | Ge2—C20—H20C | 109.5 |
| H10A—C10—H10B | 109.5 | H20A—C20—H20B | 109.5 |
| H10A—C10—H10C | 109.5 | H20A—C20—H20C | 109.5 |
| H10B—C10—H10C | 109.5 | H20B—C20—H20C | 109.5 |
| Ge1—C5—C6—C7 | −173.3 (2) | Ge2—C15—C16—C17 | 176.5 (2) |
| O1—C1—C2—C3 | 3.4 (4) | O3—C11—C12—C13 | 4.5 (4) |
| O1—C1—C2—C7 | −175.0 (3) | O3—C11—C12—C17 | −175.6 (3) |
| O2—C1—C2—C3 | −176.0 (3) | O4—C11—C12—C13 | −175.5 (3) |
| O2—C1—C2—C7 | 5.6 (5) | O4—C11—C12—C17 | 4.4 (4) |
| C1—C2—C3—C4 | −176.4 (3) | C11—C12—C13—C14 | 179.3 (3) |
| C1—C2—C7—C6 | 176.4 (3) | C11—C12—C17—C16 | −179.6 (3) |
| C2—C3—C4—C5 | 0.1 (5) | C12—C13—C14—C15 | −0.1 (5) |
| C3—C2—C7—C6 | −2.0 (5) | C13—C12—C17—C16 | 0.3 (4) |
| C3—C4—C5—Ge1 | 173.2 (2) | C13—C14—C15—Ge2 | −176.8 (2) |
| C3—C4—C5—C6 | −2.1 (5) | C13—C14—C15—C16 | 1.0 (4) |
| C4—C5—C6—C7 | 2.1 (4) | C14—C15—C16—C17 | −1.3 (4) |
| C5—C6—C7—C2 | 0.0 (5) | C15—C16—C17—C12 | 0.7 (5) |
| C7—C2—C3—C4 | 2.0 (5) | C17—C12—C13—C14 | −0.6 (4) |
| H··· | ||||
| O2—H2···O1i | 0.93 (5) | 1.71 (5) | 2.626 (3) | 170 (5) |
| O4—H4 | 0.93 (5) | 1.70 (5) | 2.635 (3) | 179 (4) |