| Literature DB >> 26089690 |
Hua Ye1, Kai Yang1, Xue-Mei Tan1, Xiao-Juan Fu1, Han-Xue Li1.
Abstract
BACKGROUND: Recent studies have demonstrated that the clock gene PER1 regulates various tumor-related genes. Abnormal expressions and circadian rhythm alterations of PER1 are closely related to carcinogenesis. However, the dynamic circadian variations of PER1 and tumor-related genes at different stages of carcinogenesis remain unknown. This study was conducted to investigate the daily rhythm variation of PER1 and expression of tumor-related genes VEGF, KI67, C-MYC, and P53 in different stages of carcinogenesis.Entities:
Keywords: PER1; carcinogenesis; circadian rhythm; clock gene; tumor
Year: 2015 PMID: 26089690 PMCID: PMC4467750 DOI: 10.2147/OTT.S83710
Source DB: PubMed Journal: Onco Targets Ther ISSN: 1178-6930 Impact factor: 4.147
Primers used for real-time PCR amplification of gene expression
| Gene | Primer | Primer sequence (5′ to 3′) |
|---|---|---|
| PER1 | Forward | AGCAACAGCCACGGTTCTC |
| Reverse | CAGTCCACACAAGCCATCAC | |
| VEGF | Forward | GACTTTGTTTGTCCAAGATCC |
| Reverse | TCACATCTGCAAGTACGTTCG | |
| KI67 | Forward | TGTATCCTTTGGTGGTCGTCTA |
| Reverse | GCTGGAGTGTGAGTGGTGAG | |
| C-MYC | Forward | GCCTACATCCTGTCCATCCA |
| Reverse | TCACGCACCAGAGTTTCG | |
| P53 | Forward | ATGCCGAATACCTGGATGAC |
| Reverse | GCGTGATGATGGTGAGGATA | |
| β-actin | Forward | GGCAGGCAAAGGTTACTCTG |
| Reverse | TGGTGACAGGTGGACAAGAT |
Abbreviation: PCR, polymerase chain reaction.
Figure 1The golden hamster buccal mucosa carcinogenesis model.
Notes: (A) Images of the golden hamster buccal mucosa from various carcinogenesis stages. (B) Pathological slice photos (HE staining, ×400) from various carcinogenesis stages.
Abbreviation: HE, hematoxylin and eosin.
The mRNA expression of PER1, VEGF, KI67, C-MYC, and P53 in normal buccal mucosa, precancerous lesion, and cancer at six different time points in 24 hours (mean ± SD, n=5)
| Gene | Group | Time point
| ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 4 HALO | 8 HALO | 12 HALO | 16 HALO | 20 HALO | 24 HALO | |||||
| PER1 | N | 0.82±0.07 | 0.91±0.08 | 1.84±0.12 | 2.58±0.08 | 1.83±0.13 | 1.60±0.05 | 0.000 | 0.000 | 0.000 |
| P | 1.93±0.17 | 1.80±0.03 | 1.28±0.21 | 0.98±0.61 | 0.41±0.07 | 0.81±0.11 | 0.000 | 0.000 | ||
| C | 0.32±0.11 | 0.91±0.22 | 0.66±0.22 | 1.39±0.19 | 1.63±0.17 | 0.38±0.22 | 0.000 | 0.003 | ||
| VEGF | N | 2.12±0.14 | 2.53±0.18 | 3.91±0.16 | 1.39±0.15 | 1.81±0.14 | 1.79±0.12 | 0.000 | 0.0062 | 0.000 |
| P | 5.81±0.36 | 4.87±0.22 | 3.99±0.12 | 1.42±0.11 | 2.13±0.21 | 2.84±0.36 | 0.000 | 0.000 | ||
| C | 7.43±0.89 | 6.34±0.97 | 5.89±0.54 | 4.67±0.51 | 7.33±0.63 | 9.51±0.84 | 0.000 | 0.0002 | ||
| KI67 | N | 1.37±0.37 | 0.54±0.18 | 0.77±0.19 | 0.37±0.10 | 0.97±0.27 | 1.10±0.44 | 0.010 | 0.0115 | 0.000 |
| P | 0.64±0.25 | 1.36±0.27 | 0.78±0.43 | 2.03±0.93 | 2.25±0.56 | 0.99±0.36 | 0.011 | 0.0246 | ||
| C | 2.62±0.53 | 1.77±0.15 | 1.71±0.28 | 1.62±0.31 | 2.59±0.39 | 1.03±0.25 | 0.001 | 0.9183 | ||
| C-MYC | N | 2.37±0.43 | 2.38±0.38 | 2.14±0.20 | 1.28±0.45 | 0.96±0.36 | 1.13±0.31 | 0.001 | 0.000 | 0.000 |
| P | 5.88±0.65 | 4.30±1.59 | 1.72±0.86 | 2.33±0.58 | 2.69±0.68 | 3.45±1.79 | 0.008 | 0.0026 | ||
| C | 5.41±2.29 | 3.04±0.30 | 2.66±0.24 | 2.85±0.29 | 5.70±3.59 | 5.67±0.56 | 0.052 | 0.0128 | ||
| P53 | N | 1.09±0.26 | 1.86±0.27 | 2.64±0.22 | 3.82±0.62 | 4.44±1.40 | 6.20±1.59 | 0.000 | 0.0032 | 0.000 |
| P | 2.64±0.63 | 2.06±0.33 | 1.23±0.28 | 2.15±0.20 | 2.63±0.62 | 3.28±0.87 | 0.011 | 0.007 | ||
| C | 1.37±0.21 | 0.84±0.17 | 0.71±0.10 | 1.63±0.17 | 1.65±0.42 | 1.40±0.34 | 0.003 | 0.0021 | ||
Notes: P<0.05 represents that there is a significant difference. P1 represents the results of the differences in the expression of each gene at six time points in each group analyzed by one-way ANOVA. P2 represents the results of the daily rhythm of expressions of each gene in each group analyzed by single cosine test. P3 represents the results of the average differences in the expressions of each gene in three groups analyzed by one-way ANOVA. Superscripts “a” and “b” represent the results of the intergroup differences analyzed by Student–Newman–Keuls test after the one-way ANOVA, as follows:
There are mutual significant differences in three groups.
There are significant differences between P or C group and N group, but there is no significant difference between P and C groups.
Abbreviations: SD, standard deviation; n, numbers; HALO, hours after light onset; N, normal buccal mucosa; P, precancerous lesion; C, cancer; ANOVA, analysis of variance.
Figure 2Cosine-fitted curves of PER1, VEGF, KI67, C-MYC, and P53 expression in normal buccal mucosa, precancerous lesions, and cancer tissues.
Note: The solid line in the figure represents the cosine-fitted curve, whereas the dotted line connects the mean values of the mRNA expression of each gene at six time points during a 24-hour period.
Abbreviation: HALO, hours after light onset.
The daily rhythm characteristics of PER1, VEGF, KI67, C-MYC, and P53 mRNA in normal buccal mucosa, precancerous lesion, and cancer
| Gene | Cosinor parameters | Tissue
| |||
|---|---|---|---|---|---|
| N | P | C | |||
| PER1 | Mesor | 1.60±0.11 | 1.20±0.06 | 0.88±0.04 | 0.000 |
| Amplitude | 0.81±0.01 | 0.71±0.01 | 0.54±0.04 | 0.000 | |
| Acrophase (HALO) | 16.93±0.04 | 7.27±0.06 | 16.73±0.18 | 0.000 | |
| VEGF | Mesor | 2.26±0.21 | 3.51±0.33 | 6.86±0.59 | 0.000 |
| Amplitude | 0.82±0.01 | 2.06±0.23 | 1.91±0.06 | 0.000 | |
| Acrophase (HALO) | 9.93±0.91 | 6.21±0.24 | 1.04±0.95 | 0.000 | |
| KI67 | Mesor | 0.85±0.42 | 1.34±0.76 | – | 0.000 |
| Amplitude | 0.39±0.07 | 0.66±0.03 | – | 0.013 | |
| Acrophase (HALO) | 1.65±0.71 | 19.93±0.74 | – | 0.003 | |
| C-MYC | Mesor | 1.71±0.10 | 3.39±0.03 | 4.22±0.11 | 0.000 |
| Amplitude | 0.83±0.06 | 1.74±0.01 | 1.87±0.04 | 0.000 | |
| Acrophase (HALO) | 7.78±0.57 | 3.92±0.55 | 23.93±0.06 | 0.000 | |
| P53 | Mesor | 3.34±0.19 | 2.33±0.26 | 1.27±0.21 | 0.000 |
| Amplitude | 1.92±0.13 | 0.86±0.08 | 0.45±0.07 | 0.000 | |
| Acrophase (HALO) | 20.47±0.81 | 23.87±0.89 | 21.06±0.73 | 0.005 | |
Notes: The daily rhythm is described as mesor, amplitude, and acrophase. P<0.05 represents that there is a significant difference. P-value represents the results of differences in each cosinor parameter of each gene in three groups analyzed by one-way ANOVA. Superscripts “a”, “b”, and “c” represent the results of the intergroup differences analyzed by Student–Newman–Keuls test after the one-way ANOVA, as follows:
There are mutual significant differences in three groups.
There are significant differences between P or C group and N group, but there is no significant difference between P and C groups.
There are significant differences between P group and C or N group, but there is no significant difference between C and N groups.
Abbreviations: N, normal buccal mucosa; P, precancerous lesion; C, cancer; HALO, hours after light onset; ANOVA, analysis of variance.