Literature DB >> 26087334

The Enzymatic Activity of Lipases Correlates with Polarity-Induced Conformational Changes: A Trp-Induced Quenching Fluorescence Study.

Jakob Skjold-Jørgensen1,2, Vikram K Bhatia2, Jesper Vind2, Allan Svendsen2, Morten J Bjerrum1, David Farrens.   

Abstract

Triacylglycerol hydrolases (EC 3.1.1.3) are thought to become activated when they encounter the water-lipid interface causing a "lid" region to move and expose the catalytic site. Here, we tested this idea by looking for lid movements in Thermomyces lanuginosus lipase (TL lipase), and in variants with a mutated lid region of esterase (Esterase) and esterase/lipase (Hybrid) character. To measure lid movements, we employed the tryptophan-induced quenching (TrIQ) fluorescence method to measure how effectively a Trp residue on the lid of these mutants (at position 87 or 89) could quench a fluorescent probe (bimane) placed at nearby site 255 on the protein. To test if lid movement is induced when the enzyme detects a lower-polarity environment (such as at the water-lipid interface), we performed these studies in solvents with different dielectric constants (ε). The results show that lid movement is highly dependent on the particular lid residue composition and solvent polarity. The data suggest that in aqueous solution (ε = 80), the Esterase lid is in an "open" conformation, whereas for the TL lipase and Hybrid, the lid remains "closed". At lower solvent polarities (ε < 46), the lid region for all of the mutants is more "open". Interestingly, these behaviors mirror the structural changes thought to take place upon activation of the enzyme at the water-lipid interface. Together, these results support the idea that lipases are more active in low-polarity solvents because the lid adopts an "open" conformation and indicate that relatively small conformational changes in the lid region play a key role in the activation mechanism of these enzymes.

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Year:  2015        PMID: 26087334     DOI: 10.1021/acs.biochem.5b00328

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  The grease trap: uncovering the mechanism of the hydrophobic lid in Cutibacterium acnes lipase.

Authors:  Hyo Jung Kim; Bong-Jin Lee; Ae-Ran Kwon
Journal:  J Lipid Res       Date:  2020-03-12       Impact factor: 5.922

2.  Critical residues and motifs for homodimerization of the first transmembrane domain of the plasma membrane glycoprotein CD36.

Authors:  Peng Wei; Fu-de Sun; Li-Min Zuo; Jing Qu; Peng Chen; Li-da Xu; Shi-Zhong Luo
Journal:  J Biol Chem       Date:  2017-03-23       Impact factor: 5.157

Review 3.  Current Trends in Acetins Production: Green versus Non-Green Synthesis.

Authors:  Bakht Zada; Moonhyuk Kwon; Seon-Won Kim
Journal:  Molecules       Date:  2022-03-30       Impact factor: 4.411

4.  Identification of a pre-active conformation of a pentameric channel receptor.

Authors:  Anaïs Menny; Solène N Lefebvre; Philipp Am Schmidpeter; Emmanuelle Drège; Zaineb Fourati; Marc Delarue; Stuart J Edelstein; Crina M Nimigean; Delphine Joseph; Pierre-Jean Corringer
Journal:  Elife       Date:  2017-03-15       Impact factor: 8.140

Review 5.  The Lid Domain in Lipases: Structural and Functional Determinant of Enzymatic Properties.

Authors:  Faez Iqbal Khan; Dongming Lan; Rabia Durrani; Weiqian Huan; Zexin Zhao; Yonghua Wang
Journal:  Front Bioeng Biotechnol       Date:  2017-03-09

6.  Direct observation of Thermomyces lanuginosus lipase diffusional states by Single Particle Tracking and their remodeling by mutations and inhibition.

Authors:  Søren S-R Bohr; Philip M Lund; Amalie S Kallenbach; Henrik Pinholt; Johannes Thomsen; Lars Iversen; Allan Svendsen; Sune M Christensen; Nikos S Hatzakis
Journal:  Sci Rep       Date:  2019-11-07       Impact factor: 4.379

  6 in total

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