Literature DB >> 26087284

Metabolically Coupled Replicator Systems: Overview of an RNA-world model concept of prebiotic evolution on mineral surfaces.

Tamás Czárán1, Balázs Könnyű2, Eörs Szathmáry3.   

Abstract

Metabolically Coupled Replicator Systems (MCRS) are a family of models implementing a simple, physico-chemically and ecologically feasible scenario for the first steps of chemical evolution towards life. Evolution in an abiotically produced RNA-population sets in as soon as any one of the RNA molecules become autocatalytic by engaging in template directed self-replication from activated monomers, and starts increasing exponentially. Competition for the finite external supply of monomers ignites selection favouring RNA molecules with catalytic activity helping self-replication by any possible means. One way of providing such autocatalytic help is to become a replicase ribozyme. An additional way is through increasing monomer supply by contributing to monomer synthesis from external resources, i.e., by evolving metabolic enzyme activity. Retroevolution may build up an increasingly autotrophic, cooperating community of metabolic ribozymes running an increasingly complicated and ever more efficient metabolism. Maintaining such a cooperating community of metabolic replicators raises two serious ecological problems: one is keeping the system coexistent in spite of the different replicabilities of the cooperating replicators; the other is constraining parasitism, i.e., keeping "cheaters" in check. Surface-bound MCRS provide an automatic solution to both problems: coexistence and parasite resistance are the consequences of assuming the local nature of metabolic interactions. In this review we present an overview of results published in previous articles, showing that these effects are, indeed, robust in different MCRS implementations, by considering different environmental setups and realistic chemical details in a few different models. We argue that the MCRS model framework naturally offers a suitable starting point for the future modelling of membrane evolution and extending the theory to cover the emergence of the first protocell in a self-consistent manner. The coevolution of metabolic, genetic and membrane functions is hypothesized to follow the progressive sequestration scenario, the conceptual blueprint for the earliest steps of protocell evolution.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Cellular automata; Coexistence; Early molecular community; Spatially explicit model; Stability

Mesh:

Substances:

Year:  2015        PMID: 26087284     DOI: 10.1016/j.jtbi.2015.06.002

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  13 in total

1.  Stable coevolutionary regimes for genetic parasites and their hosts: you must differ to coevolve.

Authors:  Faina Berezovskaya; Georgy P Karev; Mikhail I Katsnelson; Yuri I Wolf; Eugene V Koonin
Journal:  Biol Direct       Date:  2018-12-14       Impact factor: 4.540

2.  Dynamics of prebiotic RNA reproduction illuminated by chemical game theory.

Authors:  Jessica A M Yeates; Christian Hilbe; Martin Zwick; Martin A Nowak; Niles Lehman
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-18       Impact factor: 11.205

3.  Models of Replicator Proliferation Involving Differential Replicator Subunit Stability.

Authors:  Zewei Li; Runhe Lyu; John Tower
Journal:  Orig Life Evol Biosph       Date:  2018-09-10       Impact factor: 1.950

4.  Phenotype/genotype sequence complementarity and prebiotic replicator coexistence in the metabolically coupled replicator system.

Authors:  Balázs Könnyű; Tamás Czárán
Journal:  BMC Evol Biol       Date:  2014-11-25       Impact factor: 3.260

5.  Co-operation between Polymerases and Nucleotide Synthetases in the RNA World.

Authors:  Ye Eun Kim; Paul G Higgs
Journal:  PLoS Comput Biol       Date:  2016-11-07       Impact factor: 4.475

6.  An Experimental Framework for Generating Evolvable Chemical Systems in the Laboratory.

Authors:  David A Baum; Kalin Vetsigian
Journal:  Orig Life Evol Biosph       Date:  2016-11-18       Impact factor: 1.950

7.  Toy trains, loaded dice and the origin of life: dimerization on mineral surfaces under periodic drive with Gaussian inputs.

Authors:  Rowena Ball; John Brindley
Journal:  R Soc Open Sci       Date:  2017-11-08       Impact factor: 2.963

8.  Evolutionary Conflict Leads to Innovation: Symmetry Breaking in a Spatial Model of RNA-Like Replicators.

Authors:  Samuel H A von der Dunk; Enrico Sandro Colizzi; Paulien Hogeweg
Journal:  Life (Basel)       Date:  2017-11-02

Review 9.  Ecology and Evolution in the RNA World Dynamics and Stability of Prebiotic Replicator Systems.

Authors:  András Szilágyi; István Zachar; István Scheuring; Ádám Kun; Balázs Könnyű; Tamás Czárán
Journal:  Life (Basel)       Date:  2017-11-27

10.  Mathematical modeling reveals spontaneous emergence of self-replication in chemical reaction systems.

Authors:  Yu Liu; David J T Sumpter
Journal:  J Biol Chem       Date:  2018-10-03       Impact factor: 5.157

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