| Literature DB >> 26079043 |
Marianne Lucas-Hourani1,2, Hélène Munier-Lehmann3,4, Farah El Mazouni5, Nicholas A Malmquist6,7,8, Jane Harpon6,7,8, Eloi P Coutant3,4, Sandrine Guillou3,4, Olivier Helynck3,4, Anne Noel3,4, Artur Scherf6,7,8, Margaret A Phillips5, Frédéric Tangy1,2, Pierre-Olivier Vidalain1,2, Yves L Janin3,4.
Abstract
Following our discovery of human dihydroorotate dehydrogenase (DHODH) inhibition by 2-(3-alkoxy-1H-pyrazol-1-yl)pyrimidine derivatives as well as 2-(4-benzyl-3-ethoxy-5-methyl-1H-pyrazol-1-yl)-5-methylpyridine, we describe here the syntheses and evaluation of an array of azine-bearing analogues. As in our previous report, the structure-activity study of this series of human DHODH inhibitors was based on a phenotypic assay measuring measles virus replication. Among other inhibitors, this round of syntheses and biological evaluation iteration led to the highly active 5-cyclopropyl-2-(4-(2,6-difluorophenoxy)-3-isopropoxy-5-methyl-1H-pyrazol-1-yl)-3-fluoropyridine. Inhibition of DHODH by this compound was confirmed in an array of in vitro assays, including enzymatic tests and cell-based assays for viral replication and cellular growth. This molecule was found to be more active than the known inhibitors of DHODH, brequinar and teriflunomide, thus opening perspectives for its use as a tool or for the design of an original series of immunosuppressive agent. Moreover, because other series of inhibitors of human DHODH have been found to also affect Plasmodium falciparum DHODH, all the compounds were assayed for their effect on P. falciparum growth. However, the modest in vitro inhibition solely observed for two compounds did not correlate with their inhibition of P. falciparum DHODH.Entities:
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Year: 2015 PMID: 26079043 PMCID: PMC4516315 DOI: 10.1021/acs.jmedchem.5b00606
Source DB: PubMed Journal: J Med Chem ISSN: 0022-2623 Impact factor: 7.446
Figure 1Structures of compounds 1–3.
Preparation and Antiviral Effect of Compounds 6a–ua
| compd | R3 | R4 | R5 | R6 | % | pMIC50 |
|---|---|---|---|---|---|---|
| H | H | H | H | 66 | <5 | |
| H | Me | H | H | 57 | 5.4 | |
| Me | H | H | H | 39 | <5 | |
| H | H | H | Me | 39 | <5 | |
| F | H | H | H | 74 | 5.2 | |
| H | H | H | F | 62 | <5 | |
| H | H | CF3 | H | 47 | 5.5 | |
| H | H | H | CF3 | 89 | <5 | |
| H | H | Cl | H | 40 | 5.5 | |
| H | H | Br | H | 44 | 5.3 | |
| F | H | Br | H | 33 | 5.9 | |
| Me | H | Br | H | 62 | <5 | |
| H | H | CN | H | 47 | <5 | |
| H | H | CO2Me | H | 19 | <5 | |
| H | H | COMe | H | 15 | <5 | |
| H | H | OMe | H | 53 | 5.5 | |
| H | H | H | 48 | 7.0 | ||
| F | H | H | 17 | 7.0 | ||
| CN | H | H | 18 | 6.6 | ||
| H | H | COHMe2 | H | 67 | 5.3 | |
| H | H | H | 24 | 5.9 |
(i) Cs2CO3, DMF/MeCN, microwave 150–180 °C.
–log(MIC50), MIC50 in mol/L, standard deviation <2%.
Using 2-bromopyridine and a copper catalyst.[7]
Using 2-bromo-5-methoxypyridine and a copper catalyst see text and Experimental Section.
From 6j, see text and Experimental Section.
From 6t, see text and Experimental Section.
Preparation and Antiviral Effect of Compounds 8a–q and 10b–qa
| compd | R3 | Ar | pMIC50 | pMIC50 |
|---|---|---|---|---|
| Et | C6H5 | 7.0 | ||
| Et | 2-FC6H4 | 7.7 | 7.7 | |
| Et | 2-ClC6H4 | 7.9 | 7.1 | |
| Et | 2-BrC6H4 | 7.8 | 7.2 | |
| Et | 2-CF3C6H4 | 7.3 | 6.8 | |
| Et | 3-CF3C6H4 | 7.1 | 6.4 | |
| Et | 4-CF3C6H4 | 5.3 | 5.2 | |
| Et | 2,3-Cl2C6H3 | 7.9 | 7.4 | |
| Et | 2,5-Cl2C6H3 | 7.1 | 6.9 | |
| Et | 3,5-Cl2C6H3 | 6.9 | 6.2 | |
| 2-FC6H4 | 7.4 | 7.4 | ||
| 3-FC6H4 | 6.8 | 6.4 | ||
| 4-FC6H4 | 5.9 | 5.6 | ||
| 2,3-F2C6H3 | 7.4 | 7.4 | ||
| 2,4-F2C6H3 | 6.5 | 6.4 | ||
| 2,5-F2C6H3 | 7.4 | 7.0 | ||
| 2,6-F2C6H3 | 9.0 | 8.7 |
(i) Cs2CO3, MeCN, microwave 180 °C 6 h or 2 h.
–log(MIC50), MIC50 in mol/L, standard deviation <2%.
Scheme 1(i) 5-Cyclopropyl-2-fluoropyridine (5q), MeCN, microwave 180 °C 12 h; (ii) (a) BuLi, THF, −78 °C, (b) PhCOCl, −78 → 20 °C; (iii) NaBH4, EtOH; (iv) MeLi, THF, 20 °C; (v) PhB(OH)2, Pddppf, Cs2CO3, PrOH/H2O; (vi) PhCH2ZnBr, XPhos, or PhCHMeZnCl, CPhos, Pd(OAc)2, THF, 50 °C.
Preparation and Antiviral Effect of Compounds 18a–sa
| compd | R3 | R5 | % | pMIC50 |
|---|---|---|---|---|
| H | H | 66 | <5.0 | |
| H | Me | 34 | 7.6 | |
| H | CF3 | 64 | 6.5 | |
| F | 46 | 8.6 | ||
| CN | 96 | 8.1 | ||
| H | Br | 79 | 6.3 | |
| F | Br | 73 | 6.9 | |
| Me | Br | 84 | 5.9 | |
| H | OMe | 64 | 7.3 | |
| H | COCH3 | 52 | 6.6 | |
| H | COHMe2 | 68 | 6.7 | |
| H | Et | 49 | 7.1 | |
| F | Et | 34 | 7.1 | |
| H | CF2CH3 | 12 | 7.1 | |
| F | 30 | 6.7 | ||
| MeO | 70 | 7.5 | ||
| NMe2 | 62 | 7.5 | ||
| BnO | 29 | 7.0 | ||
| HO | 72 | 8.1 |
(i) Cs2CO3, DMF/MeCN, microwave, 130–180 °C.
–log(MIC50), MIC50 in mol/L, standard deviation <2%.
Using 2-bromo-5-methoxypyridine and a copper catalyst, see text and Experimental Section.
By catalytic reduction of 18d.
From 18d, see text and Experimental Section.
Reduction of 18r, see text and Experimental Section.
Figure 2Structure and antiviral effect of compounds 10q and 19–24.
Figure 3Structure and antiviral effect[1] of teriflunomide (25) and brequinar (26).
Figure 4Compound 18d is an inhibitor of pyrimidine biosynthesis pathway. HEK-293T cells were infected with recombinant MV strain expressing luciferase (multiplicity of infection = 0.1), incubated with DMSO alone or 18d at 4, 20, or 100 nM, and culture medium was supplemented with uridine (A), guanosine (B), orotate (C), or dihydroorotate (D). After 24 h, luciferase expression was determined. Experiment was performed in triplicate, and data represent means ± SD.
Normalized Cellular Nucleotides Content (%) in the Presence of Compound 18d at 0.016, 0.8, 4, 20, and 100 nM
| DMSO | 0.016 | 0.8 | 4 | 20 | 100 | |
|---|---|---|---|---|---|---|
| ATP | 100 ± 13 | 65 ± 5 | 118 ± 20 | 115 ± 13 | 213 ± 18 | 110 ± 9 |
| GTP | 100 ± 6 | 68 ± 8 | 116 ± 34 | 115 ± 9 | 246 ± 15 | 118 ± 5 |
| CTP | 100 ± 13 | 66 ± 3 | 27 ± 3 | 5 ± 2 | 4 ± 0 | 4 ± 1 |
| UTP | 100 ± 8 | 64 ± 7 | 41 ± 2 | 26 ± 2 | 5 ± 1 | 7 ± 1 |
Figure 5Compound 18d amplifies cellular response to ssRNA molecules. (top) HEK-293 T cells with the ISRE-luciferase reporter gene (STING-37 cells) were transfected with increasing doses of synthetic 5′-triphosphate RNA molecules (ssRNA) and incubated in the presence of compound 18d or DMSO alone in 96-well cultures plates. After 24 h, luciferase expression was determined. (bottom) Same experiment was performed in the presence of uridine at 30 μg/mL. Both experiments were performed in duplicate, and the data represents means ± SD.
Figure 6Inhibition (%) of Jurkat cells proliferation by compound 18d and brequinar (26). Jurkat cells were incubated with increasing doses of 18d or brequinar. As a control, cells were treated with DMSO alone. At t = 0 and after 72 h of culture, the number of living cells was determined using the CellTiter-Glo reagent. The inhibition of cellular proliferation is expressed as a percentage relative to DMSO-treated control wells. The results presented correspond to the mean ± SD of two independent experiments.