Literature DB >> 26076441

Surfaceome of classical Hodgkin and non-Hodgkin lymphoma.

Andreas Hofmann1,2, Thore Thiesler3, Bertran Gerrits4, Silvia Behnke3, Nadine Sobotzki1,5, Ulrich Omasits1, Damaris Bausch-Fluck1,5, Thomas Bock1, Ruedi Aebersold1,6, Holger Moch3, Marianne Tinguely3, Bernd Wollscheid1,5.   

Abstract

PURPOSE: Classical Hodgkin lymphoma (cHL) is characterized by a low percentage of tumor cells in a background of diverse, reactive immune cells. cHL cells commonly derive from preapoptotic germinal-center B cells and are characterized by the loss of B-cell markers and the varying expression of other hematopoietic lineage markers. This phenotypic variability and the scarcity of currently available cHL-specific cell surface markers can prevent clear distinction of cHL from related lymphomas. EXPERIMENTAL
DESIGN: We applied the cell surface capture technology to directly measure the pool of cell surface exposed proteins in four cHL and four non-Hodgkin lymphoma (NHL) cell lines.
RESULTS: More than 1000 membrane proteins, including 178 cluster of differentiation annotated proteins, were identified and allowed the generation of lymphoma surfaceome maps. The functional properties of identified cell surface proteins enable, but also limit the information exchange of lymphoma cells with their microenvironment. CONCLUSION AND CLINICAL RELEVANCE: Selected candidate proteins with potential diagnostic value were evaluated on a tissue microarray (TMA). Primary lymphoma tissues of 126 different B cell-derived lymphoma cases were included in the TMA analysis. The TMA analysis indicated gamma-glutamyltranspeptidase 1 as a potential additional marker that can be included in a panel of markers for differential diagnosis of cHL versus NHL.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Cell surface capture technology; Cell surface proteins; Classical Hodgkin lymphoma; MS-based phenotyping; Surfaceome

Mesh:

Substances:

Year:  2015        PMID: 26076441     DOI: 10.1002/prca.201400146

Source DB:  PubMed          Journal:  Proteomics Clin Appl        ISSN: 1862-8346            Impact factor:   3.494


  12 in total

1.  Cell Surface Proteomics of N-Linked Glycoproteins for Typing of Human Lymphocytes.

Authors:  Nicole A Haverland; Matthew Waas; Ioanna Ntai; Theodore Keppel; Rebekah L Gundry; Neil L Kelleher
Journal:  Proteomics       Date:  2017-10       Impact factor: 3.984

2.  Mass Spectrometry-Based Identification of Extracellular Domains of Cell Surface N-Glycoproteins: Defining the Accessible Surfaceome for Immunophenotyping Stem Cells and Their Derivatives.

Authors:  Chelsea M Fujinaka; Matthew Waas; Rebekah L Gundry
Journal:  Methods Mol Biol       Date:  2018

3.  Improved surfaceome coverage with a label-free nonaffinity-purified workflow.

Authors:  Tina Glisovic-Aplenc; Saar Gill; Lynn A Spruce; Ian R Smith; Hossein Fazelinia; Olga Shestova; Hua Ding; Sarah K Tasian; Richard Aplenc; Steven H Seeholzer
Journal:  Proteomics       Date:  2017-03-06       Impact factor: 3.984

Review 4.  Recent Advances in Glycoproteomic Analysis by Mass Spectrometry.

Authors:  Suttipong Suttapitugsakul; Fangxu Sun; Ronghu Wu
Journal:  Anal Chem       Date:  2019-11-04       Impact factor: 6.986

5.  Bioinformatics Analysis of the Human Surfaceome Reveals New Targets for a Variety of Tumor Types.

Authors:  André L Fonseca; Vandeclécio L da Silva; Marbella M da Fonsêca; Isabella T J Meira; Thayná E da Silva; José E Kroll; André M Ribeiro-Dos-Santos; Cléber R Freitas; Raimundo Furtado; Jorge E de Souza; Beatriz Stransky; Sandro J de Souza
Journal:  Int J Genomics       Date:  2016-11-14       Impact factor: 2.326

6.  Identification of Extracellular Segments by Mass Spectrometry Improves Topology Prediction of Transmembrane Proteins.

Authors:  Tamás Langó; Gergely Róna; Éva Hunyadi-Gulyás; Lilla Turiák; Julia Varga; László Dobson; György Várady; László Drahos; Beáta G Vértessy; Katalin F Medzihradszky; Gergely Szakács; Gábor E Tusnády
Journal:  Sci Rep       Date:  2017-02-13       Impact factor: 4.379

Review 7.  Concise Review: Cell Surface N-Linked Glycoproteins as Potential Stem Cell Markers and Drug Targets.

Authors:  Kenneth R Boheler; Rebekah L Gundry
Journal:  Stem Cells Transl Med       Date:  2016-07-28       Impact factor: 6.940

8.  Mast cell surfaceome characterization reveals CD98 heavy chain is critical for optimal cell function.

Authors:  Siddhartha S Saha; Nyssa B Samanas; Irina Miralda; Nicholas J Shubin; Kerri Niino; Gauri Bhise; Manasa Acharya; Albert J Seo; Nathan Camp; Gail H Deutsch; Richard G James; Adrian M Piliponsky
Journal:  J Allergy Clin Immunol       Date:  2021-07-27       Impact factor: 10.793

9.  Discovery and validation of surface N-glycoproteins in MM cell lines and patient samples uncovers immunotherapy targets.

Authors:  Robyn A A Oldham; Mary L Faber; Theodore R Keppel; Amanda R Buchberger; Matthew Waas; Parameswaran Hari; Rebekah L Gundry; Jeffrey A Medin
Journal:  J Immunother Cancer       Date:  2020-08       Impact factor: 13.751

Review 10.  A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry-Based Glycoproteomics.

Authors:  Nicholas M Riley; Carolyn R Bertozzi; Sharon J Pitteri
Journal:  Mol Cell Proteomics       Date:  2020-12-20       Impact factor: 5.911

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