Literature DB >> 26073965

Analysis of stochastic stem cell models with control.

Jienian Yang1, Zheng Sun1, Natalia L Komarova2.   

Abstract

Understanding the dynamics of stem cell lineages is of central importance both for healthy and cancerous tissues. We study stochastic population dynamics of stem cells and differentiated cells, where cell decisions, such as proliferation vs. differentiation decisions, or division and death decisions, are under regulation from surrounding cells. The goal is to understand how different types of control mechanisms affect the means and variances of cell numbers. We use the assumption of weak dependencies of the regulatory functions (the controls) on the cell populations near the equilibrium to formulate moment equations. We then study three different methods of closure, showing that they all lead to the same results for the highest order terms in the expressions for the moments. We derive simple explicit expressions for the means and the variances of stem cell and differentiated cell numbers. It turns out that the variance is expressed as an algebraic function of partial derivatives of the controls with respect to the population sizes at the equilibrium. We demonstrate that these findings are consistent with the results previously obtained in the context of particular systems, and also present two novel examples with negative and positive control of division and differentiation decisions. This methodology is formulated without any specific assumptions on the functional form of the controls, and thus can be used for any biological system.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Stem cells; differentiated cells; differentiation; proliferation; stochastic modeling

Mesh:

Year:  2015        PMID: 26073965      PMCID: PMC5680163          DOI: 10.1016/j.mbs.2015.06.001

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  58 in total

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8.  TGFbeta/Activin/Nodal pathway in inhibition of human embryonic stem cell differentiation by mechanical strain.

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9.  Mathematical modeling of cell population dynamics in the colonic crypt and in colorectal cancer.

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  7 in total

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5.  The role of cell location and spatial gradients in the evolutionary dynamics of colon and intestinal crypts.

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Journal:  Biol Direct       Date:  2016-08-23       Impact factor: 4.540

6.  Modeling large fluctuations of thousands of clones during hematopoiesis: The role of stem cell self-renewal and bursty progenitor dynamics in rhesus macaque.

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7.  A General Theoretical Framework to Study the Influence of Electrical Fields on Mesenchymal Stem Cells.

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  7 in total

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