Literature DB >> 26070565

Compartmentation of Metabolism of the C12-, C9-, and C5-n-dicarboxylates in Rat Liver, Investigated by Mass Isotopomer Analysis: ANAPLEROSIS FROM DODECANEDIOATE.

Zhicheng Jin1, Fang Bian1, Kristyen Tomcik1, Joanne K Kelleher2, Guo-Fang Zhang1, Henri Brunengraber3.   

Abstract

We investigated the compartmentation of the catabolism of dodecanedioate (DODA), azelate, and glutarate in perfused rat livers, using a combination of metabolomics and mass isotopomer analyses. Livers were perfused with recirculating or nonrecirculating buffer containing one fully (13)C-labeled dicarboxylate. Information on the peroxisomal versus mitochondrial catabolism was gathered from the labeling patterns of acetyl-CoA proxies, i.e. total acetyl-CoA, the acetyl moiety of citrate, C-1 + 2 of β-hydroxybutyrate, malonyl-CoA, and acetylcarnitine. Additional information was obtained from the labeling patterns of citric acid cycle intermediates and related compounds. The data characterize the partial oxidation of DODA and azelate in peroxisomes, with terminal oxidation in mitochondria. We did not find evidence of peroxisomal oxidation of glutarate. Unexpectedly, DODA contributes a substantial fraction to anaplerosis of the citric acid cycle. This opens the possibility to use water-soluble DODA in nutritional or pharmacological anaplerotic therapy when other anaplerotic substrates are impractical or contraindicated, e.g. in propionic acidemia and methylmalonic acidemia.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  cell compartmentalization; coenzyme A (CoA); fatty acid metabolism; isotopic tracer; liver; liver metabolism; metabolism; peroxisome; β-oxidation

Mesh:

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Year:  2015        PMID: 26070565      PMCID: PMC4513124          DOI: 10.1074/jbc.M115.651737

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  35 in total

1.  The metabolism of glutaric acid-1, 5-C14. I. In normal and phlorhizinized rats.

Authors:  M ROTHSTEIN; L L MILLER
Journal:  J Biol Chem       Date:  1952-11       Impact factor: 5.157

Review 2.  Anaplerotic molecules: current and future.

Authors:  Henri Brunengraber; Charles R Roe
Journal:  J Inherit Metab Dis       Date:  2006 Apr-Jun       Impact factor: 4.982

3.  Peroxisomal and mitochondrial oxidation of fatty acids in the heart, assessed from the 13C labeling of malonyl-CoA and the acetyl moiety of citrate.

Authors:  Fang Bian; Takhar Kasumov; Katherine R Thomas; Kathryn A Jobbins; France David; Paul E Minkler; Charles L Hoppel; Henri Brunengraber
Journal:  J Biol Chem       Date:  2004-12-16       Impact factor: 5.157

4.  Guideline for the diagnosis and management of glutaryl-CoA dehydrogenase deficiency (glutaric aciduria type I).

Authors:  S Kölker; E Christensen; J V Leonard; C R Greenberg; A B Burlina; A P Burlina; M Dixon; M Duran; S I Goodman; D M Koeller; E Müller; E R Naughten; E Neumaier-Probst; J G Okun; M Kyllerman; R A Surtees; B Wilcken; G F Hoffmann; P Burgard
Journal:  J Inherit Metab Dis       Date:  2007-01-03       Impact factor: 4.982

5.  The identification of a succinyl-CoA thioesterase suggests a novel pathway for succinate production in peroxisomes.

Authors:  Maria A K Westin; Mary C Hunt; Stefan E H Alexson
Journal:  J Biol Chem       Date:  2005-08-31       Impact factor: 5.157

6.  Novel metabolic and molecular findings in hepatic carnitine palmitoyltransferase I deficiency.

Authors:  Stanley H Korman; Hans R Waterham; Alisa Gutman; Cornelis Jakobs; Ronald J A Wanders
Journal:  Mol Genet Metab       Date:  2005-09-16       Impact factor: 4.797

7.  Metabolism of levulinate in perfused rat livers and live rats: conversion to the drug of abuse 4-hydroxypentanoate.

Authors:  Stephanie R Harris; Guo-Fang Zhang; Sushabhan Sadhukhan; Anne M Murphy; Kristyen A Tomcik; Edwin J Vazquez; Vernon E Anderson; Gregory P Tochtrop; Henri Brunengraber
Journal:  J Biol Chem       Date:  2010-12-01       Impact factor: 5.157

8.  Competition between acetate and oleate for the formation of malonyl-CoA and mitochondrial acetyl-CoA in the perfused rat heart.

Authors:  Fang Bian; Takhar Kasumov; Kathryn A Jobbins; Paul E Minkler; Vernon E Anderson; Janos Kerner; Charles L Hoppel; Henri Brunengraber
Journal:  J Mol Cell Cardiol       Date:  2006-10-03       Impact factor: 5.000

9.  Isotopomer enrichment assay for very short chain fatty acids and its metabolic applications.

Authors:  Kristyen Tomcik; Rafael A Ibarra; Sushabhan Sadhukhan; Yong Han; Gregory P Tochtrop; Guo-Fang Zhang
Journal:  Anal Biochem       Date:  2010-11-26       Impact factor: 3.365

10.  Catabolism of 4-hydroxyacids and 4-hydroxynonenal via 4-hydroxy-4-phosphoacyl-CoAs.

Authors:  Guo-Fang Zhang; Rajan S Kombu; Takhar Kasumov; Yong Han; Sushabhan Sadhukhan; Jianye Zhang; Lawrence M Sayre; Dale Ray; K Michael Gibson; Vernon A Anderson; Gregory P Tochtrop; Henri Brunengraber
Journal:  J Biol Chem       Date:  2009-09-15       Impact factor: 5.157

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  9 in total

1.  Inter-relations between 3-hydroxypropionate and propionate metabolism in rat liver: relevance to disorders of propionyl-CoA metabolism.

Authors:  Kirkland A Wilson; Yong Han; Miaoqi Zhang; Jeremy P Hess; Kimberly A Chapman; Gary W Cline; Gregory P Tochtrop; Henri Brunengraber; Guo-Fang Zhang
Journal:  Am J Physiol Endocrinol Metab       Date:  2017-06-20       Impact factor: 4.310

2.  Role of mitochondrial acyl-CoA dehydrogenases in the metabolism of dicarboxylic fatty acids.

Authors:  Sivakama S Bharathi; Yuxun Zhang; Zhenwei Gong; Radhika Muzumdar; Eric S Goetzman
Journal:  Biochem Biophys Res Commun       Date:  2020-04-29       Impact factor: 3.575

3.  Overexpression of Nudt7 decreases bile acid levels and peroxisomal fatty acid oxidation in the liver.

Authors:  Stephanie A Shumar; Evan W Kerr; Paolo Fagone; Aniello M Infante; Roberta Leonardi
Journal:  J Lipid Res       Date:  2019-03-07       Impact factor: 5.922

Review 4.  Metabolic interactions between peroxisomes and mitochondria with a special focus on acylcarnitine metabolism.

Authors:  Sander M Houten; Ronald J A Wanders; Pablo Ranea-Robles
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2020-02-10       Impact factor: 5.187

5.  The peroxisomal transporter ABCD3 plays a major role in hepatic dicarboxylic fatty acid metabolism and lipid homeostasis.

Authors:  Pablo Ranea-Robles; Hongjie Chen; Brandon Stauffer; Chunli Yu; Dipankar Bhattacharya; Scott L Friedman; Michelle Puchowicz; Sander M Houten
Journal:  J Inherit Metab Dis       Date:  2021-10-02       Impact factor: 4.982

Review 6.  The Mystery of Extramitochondrial Proteins Lysine Succinylation.

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Journal:  Int J Mol Sci       Date:  2021-06-04       Impact factor: 5.923

Review 7.  Flux analysis of inborn errors of metabolism.

Authors:  D-J Reijngoud
Journal:  J Inherit Metab Dis       Date:  2018-01-09       Impact factor: 4.982

8.  Propionate-induced changes in cardiac metabolism, notably CoA trapping, are not altered by l-carnitine.

Authors:  Yingxue Wang; Bridgette A Christopher; Kirkland A Wilson; Deborah Muoio; Robert W McGarrah; Henri Brunengraber; Guo-Fang Zhang
Journal:  Am J Physiol Endocrinol Metab       Date:  2018-07-17       Impact factor: 4.310

9.  Murine deficiency of peroxisomal L-bifunctional protein (EHHADH) causes medium-chain 3-hydroxydicarboxylic aciduria and perturbs hepatic cholesterol homeostasis.

Authors:  Pablo Ranea-Robles; Sara Violante; Carmen Argmann; Tetyana Dodatko; Dipankar Bhattacharya; Hongjie Chen; Chunli Yu; Scott L Friedman; Michelle Puchowicz; Sander M Houten
Journal:  Cell Mol Life Sci       Date:  2021-06-10       Impact factor: 9.207

  9 in total

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