Literature DB >> 26070198

Correction: Binary Gene Expression Patterning of the Molt Cycle: The Case of Chitin Metabolism.

Shai Abehsera, Lilah Glazer, Jenny Tynyakov, Inbar Plaschkes, Vered Chalifa-Caspi, Isam Khalaila, Eliahu D Aflalo, Amir Sagi.   

Abstract

Entities:  

Year:  2015        PMID: 26070198      PMCID: PMC4467492          DOI: 10.1371/journal.pone.0130787

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


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Fig 3

Enrichment analysis test results for different tissues.

Enrichment analysis test results of contigs in patterns 1111, 0110 and 0111 (a, b, and c, respectively) from the gastrolith- (left) and mandible cuticle-forming (right) epithelia. Black bars represent the observed number of hits in the sample, while grey bars represent the expected number of hits if the sample was chosen randomly. Significant differences between observed and expected number of hits are indicated by * (FDR <0.05) or ** (p-value <0.05).

Fig 5

Normalized read count of key chitin metabolism-related genes transcripts.

Read count of key chitin metabolism-related genes transcripts from the gastrolith-forming epithelium (left) and the mandible cuticle-forming epithelium (right). Numbers on the X axis represent the four molt stages, 1 inter-molt (pool of animals, n = 1), 2 early pre-molt (pool of animals, n = 1), 3 late pre-molt (two single animals and one pool, n = 3) and 4 post-molt (all single animals, n = 2). Presented transcripts are (a) chitin synthase, (b) chitinase, (c) chitin deacetylase, (d) GlcN-6P synthase and (e) GlcN-6P deaminase. Letters represent statistical groups which are significantly different (p-value <0.05), error bars represent standard error.

Enrichment analysis test results for different tissues.

Enrichment analysis test results of contigs in patterns 1111, 0110 and 0111 (a, b, and c, respectively) from the gastrolith- (left) and mandible cuticle-forming (right) epithelia. Black bars represent the observed number of hits in the sample, while grey bars represent the expected number of hits if the sample was chosen randomly. Significant differences between observed and expected number of hits are indicated by * (FDR <0.05) or ** (p-value <0.05).

Normalized read count of key chitin metabolism-related genes transcripts.

Read count of key chitin metabolism-related genes transcripts from the gastrolith-forming epithelium (left) and the mandible cuticle-forming epithelium (right). Numbers on the X axis represent the four molt stages, 1 inter-molt (pool of animals, n = 1), 2 early pre-molt (pool of animals, n = 1), 3 late pre-molt (two single animals and one pool, n = 3) and 4 post-molt (all single animals, n = 2). Presented transcripts are (a) chitin synthase, (b) chitinase, (c) chitin deacetylase, (d) GlcN-6P synthase and (e) GlcN-6P deaminase. Letters represent statistical groups which are significantly different (p-value <0.05), error bars represent standard error.
  1 in total

1.  Binary gene expression patterning of the molt cycle: the case of chitin metabolism.

Authors:  Shai Abehsera; Lilah Glazer; Jenny Tynyakov; Inbar Plaschkes; Vered Chalifa-Caspi; Isam Khalaila; Eliahu D Aflalo; Amir Sagi
Journal:  PLoS One       Date:  2015-04-28       Impact factor: 3.240

  1 in total
  3 in total

1.  Whole Transcriptome Analysis Provides Insights into Molecular Mechanisms for Molting in Litopenaeus vannamei.

Authors:  Yi Gao; Xiaojun Zhang; Jiankai Wei; Xiaoqing Sun; Jianbo Yuan; Fuhua Li; Jianhai Xiang
Journal:  PLoS One       Date:  2015-12-09       Impact factor: 3.240

Review 2.  Resources and Recommendations for Using Transcriptomics to Address Grand Challenges in Comparative Biology.

Authors:  Donald L Mykles; Karen G Burnett; David S Durica; Blake L Joyce; Fiona M McCarthy; Carl J Schmidt; Jonathon H Stillman
Journal:  Integr Comp Biol       Date:  2016-09-17       Impact factor: 3.326

3.  Whole-body transcriptome analysis provides insights into the cascade of sequential expression events involved in growth, immunity, and metabolism during the molting cycle in Scylla paramamosain.

Authors:  Lei Liu; Xiao Liu; Yuanyuan Fu; Wei Fang; Chunlin Wang
Journal:  Sci Rep       Date:  2022-07-06       Impact factor: 4.996

  3 in total

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