Literature DB >> 26063254

Standardized data sharing in a paediatric oncology research network--a proof-of-concept study.

Nina Hochedlinger1, Michael Nitzlnader1, Markus Falgenhauer1, Stefan Welte1, Dieter Hayn1, Lefteris Koumakis2, George Potamias2, Manolis Tsiknakis2, Davide Saraceno3, Eugenia Rinaldi3, Ruth Ladenstein4, Günter Schreier1.   

Abstract

Data that has been collected in the course of clinical trials are potentially valuable for additional scientific research questions in so called secondary use scenarios. This is of particular importance in rare disease areas like paediatric oncology. If data from several research projects need to be connected, so called Core Datasets can be used to define which information needs to be extracted from every involved source system. In this work, the utility of the Clinical Data Interchange Standards Consortium (CDISC) Operational Data Model (ODM) as a format for Core Datasets was evaluated and a web tool was developed which received Source ODM XML files and--via Extensible Stylesheet Language Transformation (XSLT)--generated standardized Core Dataset ODM XML files. Using this tool, data from different source systems were extracted and pooled for joined analysis in a proof-of-concept study, facilitating both, basic syntactic and semantic interoperability.

Mesh:

Year:  2015        PMID: 26063254

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  4 in total

1.  S2O - A software tool for integrating research data from general purpose statistic software into electronic data capture systems.

Authors:  Philipp Bruland; Martin Dugas
Journal:  BMC Med Inform Decis Mak       Date:  2017-01-07       Impact factor: 2.796

2.  BioSCOOP - Biobank Sample Communication Protocol. New approach for the transfer of information between biobanks.

Authors:  J Jarczak; J Lach; P Borówka; M Gałka; M Bućko; B Marciniak; D Strapagiel
Journal:  Database (Oxford)       Date:  2019-01-01       Impact factor: 3.451

Review 3.  Influenza and other respiratory viruses: standardizing disease severity in surveillance and clinical trials.

Authors:  Barbara Rath; Tim Conrad; Puja Myles; Maren Alchikh; Xiaolin Ma; Christian Hoppe; Franziska Tief; Xi Chen; Patrick Obermeier; Bron Kisler; Brunhilde Schweiger
Journal:  Expert Rev Anti Infect Ther       Date:  2017-05-12       Impact factor: 5.091

4.  User-Friendly Data-Sharing Practices for Fostering Collaboration within a Research Network: Roles of a Vanguard Center for a Community-Based Study.

Authors:  Jae Eun Lee; Jung Hye Sung; M Edwina Barnett; Keith Norris
Journal:  Int J Environ Res Public Health       Date:  2015-12-22       Impact factor: 3.390

  4 in total

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