Literature DB >> 26056074

Privacy preserving processing of genomic data: A survey.

Mete Akgün1, A Osman Bayrak2, Bugra Ozer3, M Şamil Sağıroğlu4.   

Abstract

Recently, the rapid advance in genome sequencing technology has led to production of huge amount of sensitive genomic data. However, a serious privacy challenge is confronted with increasing number of genetic tests as genomic data is the ultimate source of identity for humans. Lately, privacy threats and possible solutions regarding the undesired access to genomic data are discussed, however it is challenging to apply proposed solutions to real life problems due to the complex nature of security definitions. In this review, we have categorized pre-existing problems and corresponding solutions in more understandable and convenient way. Additionally, we have also included open privacy problems coming with each genomic data processing procedure. We believe our classification of genome associated privacy problems will pave the way for linking of real-life problems with previously proposed methods.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Genomics; Privacy; Security

Mesh:

Year:  2015        PMID: 26056074     DOI: 10.1016/j.jbi.2015.05.022

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  6 in total

Review 1.  Privacy challenges and research opportunities for genomic data sharing.

Authors:  Luca Bonomi; Yingxiang Huang; Lucila Ohno-Machado
Journal:  Nat Genet       Date:  2020-06-29       Impact factor: 38.330

Review 2.  Privacy-preserving techniques of genomic data-a survey.

Authors:  Md Momin Al Aziz; Md Nazmus Sadat; Dima Alhadidi; Shuang Wang; Xiaoqian Jiang; Cheryl L Brown; Noman Mohammed
Journal:  Brief Bioinform       Date:  2019-05-21       Impact factor: 11.622

3.  Parallel and private generalized suffix tree construction and query on genomic data.

Authors:  Md Momin Al Aziz; Parimala Thulasiraman; Noman Mohammed
Journal:  BMC Genom Data       Date:  2022-06-17

Review 4.  An overview of human genetic privacy.

Authors:  Xinghua Shi; Xintao Wu
Journal:  Ann N Y Acad Sci       Date:  2016-09-14       Impact factor: 5.691

5.  Who's afraid of genetic tests?: An assessment of Singapore's public attitudes and changes in attitudes after taking a genetic test.

Authors:  Ross Cheung; Shreshtha Jolly; Manoj Vimal; Hie Lim Kim; Ian McGonigle
Journal:  BMC Med Ethics       Date:  2022-01-26       Impact factor: 2.652

6.  Efficient Privacy-Preserving Whole Genome Variant Queries.

Authors:  Mete Akgün; Nico Pfeifer; Oliver Kohlbacher
Journal:  Bioinformatics       Date:  2022-02-12       Impact factor: 6.937

  6 in total

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