Literature DB >> 26055718

New Insights into the Coupling between Microtubule Depolymerization and ATP Hydrolysis by Kinesin-13 Protein Kif2C.

Weiyi Wang1, Ting Shen2, Raphael Guerois3, Fuming Zhang2, Hureshitanmu Kuerban2, Yuncong Lv2, Benoît Gigant4, Marcel Knossow5, Chunguang Wang6.   

Abstract

Kinesin-13 proteins depolymerize microtubules in an ATP hydrolysis-dependent manner. The coupling between these two activities remains unclear. Here, we first studied the role of the kinesin-13 subfamily-specific loop 2 and of the KVD motif at the tip of this loop. Shortening the loop, the lysine/glutamate interchange and the additional Val to Ser substitution all led to Kif2C mutants with decreased microtubule-stimulated ATPase and impaired depolymerization capability. We rationalized these results based on a structural model of the Kif2C-ATP-tubulin complex derived from the recently determined structures of kinesin-1 bound to tubulin. In this model, upon microtubule binding Kif2C undergoes a conformational change governed in part by the interaction of the KVD motif with the tubulin interdimer interface. Second, we mutated to an alanine the conserved glutamate residue of the switch 2 nucleotide binding motif. This mutation blocks motile kinesins in a post-conformational change state and inhibits ATP hydrolysis. This Kif2C mutant still depolymerized microtubules and yielded complexes of one Kif2C with two tubulin heterodimers. These results demonstrate that the structural change of Kif2C-ATP upon binding to microtubule ends is sufficient for tubulin release, whereas ATP hydrolysis is not required. Overall, our data suggest that the conformation reached by kinesin-13s upon tubulin binding is similar to that of tubulin-bound, ATP-bound, motile kinesins but that this conformation is adapted to microtubule depolymerization.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  ATPase; conformational change; kinesin; microtubule; molecular motor

Mesh:

Substances:

Year:  2015        PMID: 26055718      PMCID: PMC4513128          DOI: 10.1074/jbc.M115.646919

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  38 in total

1.  A structural change in the kinesin motor protein that drives motility.

Authors:  S Rice; A W Lin; D Safer; C L Hart; N Naber; B O Carragher; S M Cain; E Pechatnikova; E M Wilson-Kubalek; M Whittaker; E Pate; R Cooke; E W Taylor; R A Milligan; R D Vale
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

2.  The kinesin-related protein MCAK is a microtubule depolymerase that forms an ATP-hydrolyzing complex at microtubule ends.

Authors:  Andrew W Hunter; Michael Caplow; David L Coy; William O Hancock; Stefan Diez; Linda Wordeman; Jonathon Howard
Journal:  Mol Cell       Date:  2003-02       Impact factor: 17.970

Review 3.  The molecular motor toolbox for intracellular transport.

Authors:  Ronald D Vale
Journal:  Cell       Date:  2003-02-21       Impact factor: 41.582

4.  Insight into tubulin regulation from a complex with colchicine and a stathmin-like domain.

Authors:  Raimond B G Ravelli; Benoît Gigant; Patrick A Curmi; Isabelle Jourdain; Sylvie Lachkar; André Sobel; Marcel Knossow
Journal:  Nature       Date:  2004-03-11       Impact factor: 49.962

5.  Kin I kinesins are microtubule-destabilizing enzymes.

Authors:  A Desai; S Verma; T J Mitchison; C E Walczak
Journal:  Cell       Date:  1999-01-08       Impact factor: 41.582

6.  The structure of apo-kinesin bound to tubulin links the nucleotide cycle to movement.

Authors:  Luyan Cao; Weiyi Wang; Qiyang Jiang; Chunguang Wang; Marcel Knossow; Benoît Gigant
Journal:  Nat Commun       Date:  2014-11-14       Impact factor: 14.919

Review 7.  The kinetic mechanism of kinesin.

Authors:  Robert A Cross
Journal:  Trends Biochem Sci       Date:  2004-06       Impact factor: 13.807

8.  Kinesin superfamily protein 2A (KIF2A) functions in suppression of collateral branch extension.

Authors:  Noriko Homma; Yosuke Takei; Yosuke Tanaka; Takao Nakata; Sumio Terada; Masahide Kikkawa; Yasuko Noda; Nobutaka Hirokawa
Journal:  Cell       Date:  2003-07-25       Impact factor: 41.582

Review 9.  Microtubule-depolymerizing kinesins.

Authors:  Claire E Walczak; Sophia Gayek; Ryoma Ohi
Journal:  Annu Rev Cell Dev Biol       Date:  2013-07-17       Impact factor: 11.902

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

View more
  9 in total

Review 1.  These motors were made for walking.

Authors:  Byron Hunter; John S Allingham
Journal:  Protein Sci       Date:  2020-06-26       Impact factor: 6.725

2.  KIF2C regulates synaptic plasticity and cognition in mice through dynamic microtubule depolymerization.

Authors:  Rui Zheng; Yonglan Du; Xintai Wang; Tailin Liao; Zhe Zhang; Na Wang; Xiumao Li; Ying Shen; Lei Shi; Jianhong Luo; Jun Xia; Ziyi Wang; Junyu Xu
Journal:  Elife       Date:  2022-02-09       Impact factor: 8.140

3.  Insight into microtubule disassembly by kinesin-13s from the structure of Kif2C bound to tubulin.

Authors:  Weiyi Wang; Soraya Cantos-Fernandes; Yuncong Lv; Hureshitanmu Kuerban; Shoeb Ahmad; Chunguang Wang; Benoît Gigant
Journal:  Nat Commun       Date:  2017-07-10       Impact factor: 14.919

4.  Microarray Expression Profile of lncRNAs and mRNAs in Rats with Traumatic Brain Injury after A2B5+ Cell Transplantation.

Authors:  Qiang Lyu; Zi-Bin Zhang; Song-Jun Fu; Liu-Lin Xiong; Jing Liu; Ting-Hua Wang
Journal:  Cell Transplant       Date:  2017-10       Impact factor: 4.064

5.  Ternary complex of Kif2A-bound tandem tubulin heterodimers represents a kinesin-13-mediated microtubule depolymerization reaction intermediate.

Authors:  Daria Trofimova; Mohammadjavad Paydar; Anthony Zara; Lama Talje; Benjamin H Kwok; John S Allingham
Journal:  Nat Commun       Date:  2018-07-06       Impact factor: 14.919

6.  The depolymerase activity of MCAK shows a graded response to Aurora B kinase phosphorylation through allosteric regulation.

Authors:  Toni McHugh; Juan Zou; Vladimir A Volkov; Aurélie Bertin; Sandeep K Talapatra; Juri Rappsilber; Marileen Dogterom; Julie P I Welburn
Journal:  J Cell Sci       Date:  2019-01-14       Impact factor: 5.285

7.  Kinesin-8-specific loop-2 controls the dual activities of the motor domain according to tubulin protofilament shape.

Authors:  Byron Hunter; Matthieu P M H Benoit; Ana B Asenjo; Caitlin Doubleday; Daria Trofimova; Corey Frazer; Irsa Shoukat; Hernando Sosa; John S Allingham
Journal:  Nat Commun       Date:  2022-07-20       Impact factor: 17.694

Review 8.  Review: Mechanochemistry of the kinesin-1 ATPase.

Authors:  R A Cross
Journal:  Biopolymers       Date:  2016-08       Impact factor: 2.505

9.  Cryo-EM reveals the structural basis of microtubule depolymerization by kinesin-13s.

Authors:  Matthieu P M H Benoit; Ana B Asenjo; Hernando Sosa
Journal:  Nat Commun       Date:  2018-04-25       Impact factor: 14.919

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.