Literature DB >> 26054681

Association of seven thrombotic pathway gene CpG-SNPs with coronary heart disease.

Huadan Ye1, Annan Zhou1, Qingxiao Hong1, Xiaoying Chen1, Yanfei Xin2, Linlin Tang1, Dongjun Dai1, Huihui Ji1, Mingqing Xu3, Dao Wen Wang4, Shiwei Duan5.   

Abstract

OBJECTIVES: Coronary heart disease (CHD) has been considered a thromboembolic arterial diseases. The aim of this case-control study was to explore whether the CpG-SNPs of the thrombotic pathway genes contributed to the risk of CHD. METHODS AND MATERIALS: A total of 784 CHD patients and 738 healthy controls were recruited in the current association study, which evaluated 7 CpG-SNPs of the thrombotic pathway genes. The CpG-SNPs included THBS4 rs17878919, CYP2C19 rs12773342, P2RY12 rs1491974, ITGA2 rs26680, FGB rs2227389, F7 rs510317 and F5 rs2269648. SNP genotyping was performed with a Sequenom Mass Spectrometry Genetic Analyzer.
RESULTS: Our results demonstrated that CYP2C19 rs12773342 polymorphism was significantly associated with CHD in the recessive model (χ(2)=5.41, df=1, P=0.020, OR=1.455, 95% CI=1.060-1.996). A breakdown analysis by age showed that the association of CYP2C19 rs12773342 with CHD was mainly found in individuals aged 55-65 (genotype: χ(2)=7.93, df=2, P=0.019; allele: χ(2)=4.45, df=1, P=0.035). In addition, we also observed a significant association between F7 rs510317 polymorphism and CHD in males (genotype: χ(2)=7.24, df=2, P=0.027). There was no significant association with CHD for the remaining CpG-SNPs.
CONCLUSION: Our results supported that the CYP2C19 rs12773342 and F7 rs510317 polymorphisms were associated with CHD in the Han Chinese population.
Copyright © 2015 Elsevier Masson SAS. All rights reserved.

Entities:  

Keywords:  Coronary heart disease; CpG-SNP; Polymorphism; Promoter; Thrombosis

Mesh:

Substances:

Year:  2015        PMID: 26054681     DOI: 10.1016/j.biopha.2015.04.009

Source DB:  PubMed          Journal:  Biomed Pharmacother        ISSN: 0753-3322            Impact factor:   6.529


  4 in total

Review 1.  Making sense of GWAS: using epigenomics and genome engineering to understand the functional relevance of SNPs in non-coding regions of the human genome.

Authors:  Yu Gyoung Tak; Peggy J Farnham
Journal:  Epigenetics Chromatin       Date:  2015-12-30       Impact factor: 4.954

2.  Study of the association of 17 lipid-related gene polymorphisms with coronary heart disease.

Authors:  Nan Wu; Guili Liu; Yi Huang; Qi Liao; Liyuan Han; Huandan Ye; Shiwei Duan; Xiaomin Chen
Journal:  Anatol J Cardiol       Date:  2018-06       Impact factor: 1.596

3.  A male-specific association between AGTR1 hypermethylation and coronary heart disease.

Authors:  Xiaojing Li; Nan Wu; Huihui Ji; Yi Huang; Haochang Hu; Jiyi Li; Siyu Mi; Shiwei Duan; Xiaomin Chen
Journal:  Bosn J Basic Med Sci       Date:  2020-02-05       Impact factor: 3.363

4.  Association of six CpG-SNPs in the inflammation-related genes with coronary heart disease.

Authors:  Xiaomin Chen; Xiaoying Chen; Yan Xu; William Yang; Nan Wu; Huadan Ye; Jack Y Yang; Qingxiao Hong; Yanfei Xin; Mary Qu Yang; Youping Deng; Shiwei Duan
Journal:  Hum Genomics       Date:  2016-07-25       Impact factor: 4.639

  4 in total

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