Literature DB >> 26052389

Genetic ancestry analysis in non-alcoholic fatty liver disease patients from Brazil and Portugal.

Lourianne Nascimento Cavalcante1, Jose Tadeu Stefano1, Mariana V Machado1, Daniel F Mazo1, Fabiola Rabelo1, Kiyoko Abe Sandes1, Flair José Carrilho1, Helena Cortez-Pinto1, Andre Castro Lyra1, Claudia P de Oliveira1.   

Abstract

AIM: To study the association between genetic ancestry, non-alcoholic fatty liver disease (NAFLD) metabolic characteristics in two cohorts of patients, from Brazil and Portugal.
METHODS: We included 131 subjects from Brazil [(n = 45 with simple steatosis (S. Steatosis) and n = 86 with nonalcoholic steatohepatitis (NASH)] and 90 patients from Portugal (n = 66, S. Steatosis; n = 24, NASH). All patients had biopsy-proven NAFLD. In histologic evaluation NAFLD activity score was used to assess histology and more than 5 points defined NASH in this study. Patients were divided into two groups according to histology diagnosis: simple steatosis or non-alcoholic statohepatitis. Genetic ancestry was assessed using real-time polymerase chain reaction. Seven ancestry informative markers (AT3-I/D, LPL, Sb19.3, APO, FY-Null, PV92, and CKMM) with the greatest ethnic-geographical differential frequencies (≥ 48%) were used to define genetic ancestry. Data were analyzed using R PROJECTS software. Ancestry allele frequencies between groups were analyzed by GENEPOP online and the estimation of genetic ancestry contribution was evaluated by ADMIX-95 software. The 5% alpha-error was considered as significant (P < 0.05).
RESULTS: In the Brazilian sample, NASH was significantly more frequent among the elderly patients with diabetes (NASH 56 ± 1.1 years old vs S. Steatosis 51 ± 1.5 years old, P = 3.7 x 10(-9)), dyslipidemia (NASH 63% vs S. Steatosis 37%, P = 0.009), higher fasting glucose levels (NASH 124 ± 5.2 vs S. Steatosis 106 ± 5.3, P = 0.001) and Homeostatic Model of Assessment index > 2.5 [NASH 5.3 (70.8%) vs S. Steatosis 4.6 (29.2%) P = 0.04]. In the Portuguese study population, dyslipidemia was present in all patients with NASH (P = 0.03) and hypertension was present in a larger percentage of subjects in the S. Steatosis group (P = 0.003, respectively). The genetic ancestry contribution among Brazilian and Portuguese individuals with NASH was similar to those with S. Steatosis from each cohort (Brazilian cohort: P = 0.75; Portuguese cohort: P = 0.97). Nonetheless, the genetic ancestry contribution of the Brazilian and Portuguese population were different, and a greater European and Amerindian ancestry contribution was detected in the Portuguese population while a higher African genetic ancestry contribution was observed in Brazilian population of both NASH and S. Steatosis groups.
CONCLUSION: There was no difference between the genetic ancestry contribution among Brazilian and Portuguese individuals with NASH and S. Steatosis from each cohort.

Entities:  

Keywords:  Admixed population; Ancestry; Nonalcoholic fatty liver disease; Nonalcoholic steatohepatitis; Simple steatosis

Year:  2015        PMID: 26052389      PMCID: PMC4450207          DOI: 10.4254/wjh.v7.i10.1433

Source DB:  PubMed          Journal:  World J Hepatol


  16 in total

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2.  Genetic composition of Brazilian population samples based on a set of twenty-eight ancestry informative SNPs.

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5.  Haplotype diversity in mitochondrial DNA hypervariable region in a population of southeastern Brazil.

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7.  Design and validation of a histological scoring system for nonalcoholic fatty liver disease.

Authors:  David E Kleiner; Elizabeth M Brunt; Mark Van Natta; Cynthia Behling; Melissa J Contos; Oscar W Cummings; Linda D Ferrell; Yao-Chang Liu; Michael S Torbenson; Aynur Unalp-Arida; Matthew Yeh; Arthur J McCullough; Arun J Sanyal
Journal:  Hepatology       Date:  2005-06       Impact factor: 17.425

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Journal:  Mol Biol Rep       Date:  2012-10-30       Impact factor: 2.316

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Authors:  Tailce K M Leite; Rômulo M C Fonseca; Nanci M de França; Esteban J Parra; Rinaldo W Pereira
Journal:  PLoS One       Date:  2011-11-02       Impact factor: 3.240

10.  Genetic predisposition in NAFLD and NASH: impact on severity of liver disease and response to treatment.

Authors:  Paola Dongiovanni; Quentin M Anstee; Luca Valenti
Journal:  Curr Pharm Des       Date:  2013       Impact factor: 3.116

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Journal:  An Bras Dermatol       Date:  2018 Jan-Feb       Impact factor: 1.896

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Authors:  Gabriela P F Arrifano; Rosa C R Martín-Doimeadios; María Jiménez-Moreno; Sergio Fernández-Trujillo; Marcus Augusto-Oliveira; José R Souza-Monteiro; Barbarella M Macchi; Jacqueline I Alvarez-Leite; José L M do Nascimento; Marcos T Amador; Sidney Santos; Ândrea Ribeiro-Dos-Santos; Liz C Silva-Pereira; Reinaldo B Oriá; Maria E Crespo-Lopez
Journal:  Front Genet       Date:  2018-07-27       Impact factor: 4.599

3.  PNPLA3 and TM6SF2 polymorphisms in Brazilian patients with nonalcoholic fatty liver disease.

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Journal:  World J Hepatol       Date:  2020-10-27
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