Literature DB >> 26048423

Posttranslational regulation of microbial metabolism.

Karl Kochanowski1, Uwe Sauer2, Elad Noor3.   

Abstract

Fluxes in microbial metabolism are controlled by various regulatory layers that alter abundance or activity of metabolic enzymes. Recent studies suggest a division of labor between these layers: transcriptional regulation mostly controls the allocation of protein resources, passive flux regulation by enzyme saturation and thermodynamics allows rapid responses at the expense of higher protein cost, and posttranslational regulation is utilized by cells to directly take control of metabolic decisions. We present recent advances in elucidating the role of these regulatory layers, focusing on posttranslational modifications and allosteric interactions. As the systematic mapping of posttranslational regulatory events has now become possible, the next challenge is to identify those regulatory events that are functionally relevant under a given condition.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2015        PMID: 26048423     DOI: 10.1016/j.mib.2015.05.007

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  14 in total

1.  Characterizing posttranslational modifications in prokaryotic metabolism using a multiscale workflow.

Authors:  Elizabeth Brunk; Roger L Chang; Jing Xia; Hooman Hefzi; James T Yurkovich; Donghyuk Kim; Evan Buckmiller; Harris H Wang; Byung-Kwan Cho; Chen Yang; Bernhard O Palsson; George M Church; Nathan E Lewis
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-09       Impact factor: 11.205

2.  Dynamic metabolic control: towards precision engineering of metabolism.

Authors:  Di Liu; Ahmad A Mannan; Yichao Han; Diego A Oyarzún; Fuzhong Zhang
Journal:  J Ind Microbiol Biotechnol       Date:  2018-01-29       Impact factor: 3.346

3.  Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitro kcat measurements.

Authors:  Dan Davidi; Elad Noor; Wolfram Liebermeister; Arren Bar-Even; Avi Flamholz; Katja Tummler; Uri Barenholz; Miki Goldenfeld; Tomer Shlomi; Ron Milo
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

Review 4.  Synthetic biology and regulatory networks: where metabolic systems biology meets control engineering.

Authors:  Fei He; Ettore Murabito; Hans V Westerhoff
Journal:  J R Soc Interface       Date:  2016-04-13       Impact factor: 4.118

5.  Post-translational Succinylation of Mycobacterium tuberculosis Enoyl-CoA Hydratase EchA19 Slows Catalytic Hydration of Cholesterol Catabolite 3-Oxo-chol-4,22-diene-24-oyl-CoA.

Authors:  Amber C Bonds; Tianao Yuan; Joshua M Werman; Jungwon Jang; Rui Lu; Natasha M Nesbitt; Miguel Garcia-Diaz; Nicole S Sampson
Journal:  ACS Infect Dis       Date:  2020-07-27       Impact factor: 5.084

Review 6.  Mass Spectrometry Offers Insight into the Role of Ser/Thr/Tyr Phosphorylation in the Mycobacteria.

Authors:  Bridget Calder; Claudia Albeldas; Jonathan M Blackburn; Nelson C Soares
Journal:  Front Microbiol       Date:  2016-02-12       Impact factor: 5.640

7.  Few regulatory metabolites coordinate expression of central metabolic genes in Escherichia coli.

Authors:  Karl Kochanowski; Luca Gerosa; Simon F Brunner; Dimitris Christodoulou; Yaroslav V Nikolaev; Uwe Sauer
Journal:  Mol Syst Biol       Date:  2017-01-03       Impact factor: 11.429

8.  Protein lysine acetylation plays a regulatory role in Bacillus subtilis multicellularity.

Authors:  Alicyn Reverdy; Yun Chen; Evan Hunter; Kevin Gozzi; Yunrong Chai
Journal:  PLoS One       Date:  2018-09-28       Impact factor: 3.240

9.  Rapid proliferation due to better metabolic adaptation results in full virulence of a filament-deficient Candida albicans strain.

Authors:  Christine Dunker; Melanie Polke; Bianca Schulze-Richter; Katja Schubert; Sven Rudolphi; A Elisabeth Gressler; Tony Pawlik; Juan P Prada Salcedo; M Joanna Niemiec; Silvia Slesiona-Künzel; Marc Swidergall; Ronny Martin; Thomas Dandekar; Ilse D Jacobsen
Journal:  Nat Commun       Date:  2021-06-23       Impact factor: 14.919

10.  A system-wide network reconstruction of gene regulation and metabolism in Escherichia coli.

Authors:  Anne Grimbs; David F Klosik; Stefan Bornholdt; Marc-Thorsten Hütt
Journal:  PLoS Comput Biol       Date:  2019-05-03       Impact factor: 4.475

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