Literature DB >> 26048370

Supratidal Extremophiles--Cyanobacterial Diversity in the Rock Pools of the Croatian Adria.

Maria Brandes1, Dirk C Albach1, Janina C Vogt1, Eike Mayland-Quellhorst1, Glenda Mendieta-Leiva2, Stjepko Golubic3, Katarzyna A Palinska4.   

Abstract

Hardly any molecular studies have been done on euendoliths of marine coastal environments, especially along the supratidal ranges of carbonate coasts. In our study, we provide a comparative sequence analysis using 454 pyrosequencing of the 16S ribosomal RNA (rRNA) gene combined with extensive microscopy of the endolithic community from rock pools of the Croatian Adria. Molecular diversity indices and richness estimates showed high level of diversity, particularly in high-salinity samples. The most common cyanobacteria belong to the order Pleurocapsales, similar to observations on limestone coasts in other parts of the world. Using single-cell amplification sequences of Hormathonema spp., Hyella caespitosa, and Kyrtuthrix dalmatica was for the first time introduced to the public GenBank.Microscopic investigations did not show qualitative variances in diversity among sites with different salinity but clear differences in prevalent organisms from similar environments suggesting that most of them are adapted to inhabit extreme, marine endolithic habitats and that similar species inhabit geographically separated but ecologically similar environments. This is a remarkable concordance rather seldom seen in molecular community studies in support of the hypothesis that endolithic ecosystems are seeded from a global meta-community.The relative diversity of the community is greater than those described from harsh endolithic habitats of cold and hot deserts. The maximum likelihood phylogenetic tree consisting of 166 operational taxonomic units (OTUs) at 96 % sequence similarity revealed 11 distinct clusters. Three clusters contained only epilithic or endolithic taxa, and five clusters contained mixed epilithic and endolithic taxa. Organisms clustered according to their taxonomic affiliations and not to their preferences to salt concentrations.

Entities:  

Keywords:  Cyanobacteria; Endoliths; Pyrosequencing; Rare biosphere

Mesh:

Substances:

Year:  2015        PMID: 26048370     DOI: 10.1007/s00248-015-0637-0

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  21 in total

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Review 2.  Release and persistence of extracellular DNA in the environment.

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3.  Phylogenetic composition of Rocky Mountain endolithic microbial ecosystems.

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4.  Microbial diversity and the presence of algae in halite endolithic communities are correlated to atmospheric moisture in the hyper-arid zone of the Atacama Desert.

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Journal:  Environ Microbiol       Date:  2014-01-28       Impact factor: 5.491

5.  Endolithic microbial colonization of limestone in a high-altitude arid environment.

Authors:  Fiona K Y Wong; Maggie C Y Lau; Donnabella C Lacap; Jonathan C Aitchison; Donald A Cowan; Stephen B Pointing
Journal:  Microb Ecol       Date:  2009-11-25       Impact factor: 4.552

Review 6.  Microbial ecology of hot desert edaphic systems.

Authors:  Thulani P Makhalanyane; Angel Valverde; Eoin Gunnigle; Aline Frossard; Jean-Baptiste Ramond; Don A Cowan
Journal:  FEMS Microbiol Rev       Date:  2015-01-23       Impact factor: 16.408

7.  Endolithic bacterial communities in rock coatings from Kärkevagge, Swedish Lapland.

Authors:  Cassandra L Marnocha; John C Dixon
Journal:  FEMS Microbiol Ecol       Date:  2014-09-09       Impact factor: 4.194

8.  Identification of the metabolically active members of a bacterial community in a polychlorinated biphenyl-polluted moorland soil.

Authors:  B Nogales; E R Moore; W R Abraham; K N Timmis
Journal:  Environ Microbiol       Date:  1999-06       Impact factor: 5.491

9.  Cyanobacteria and chloroflexi-dominated hypolithic colonization of quartz at the hyper-arid core of the Atacama Desert, Chile.

Authors:  Donnabella C Lacap; Kimberley A Warren-Rhodes; Christopher P McKay; Stephen B Pointing
Journal:  Extremophiles       Date:  2010-11-11       Impact factor: 2.395

10.  Highly specialized microbial diversity in hyper-arid polar desert.

Authors:  Stephen B Pointing; Yuki Chan; Donnabella C Lacap; Maggie C Y Lau; Joel A Jurgens; Roberta L Farrell
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-22       Impact factor: 11.205

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1.  Microbiomes of Biofilms on Decorative Siliceous Stone: Drawbacks and Advantages of Next Generation Sequencing.

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Journal:  Curr Microbiol       Date:  2017-05-02       Impact factor: 2.188

2.  Cyanobacterial Contribution to Travertine Deposition in the Hoyoux River System, Belgium.

Authors:  Julia Kleinteich; Stjepko Golubic; Igor S Pessi; David Velázquez; Jean-Yves Storme; François Darchambeau; Alberto V Borges; Philippe Compère; Gudrun Radtke; Seong-Joo Lee; Emmanuelle J Javaux; Annick Wilmotte
Journal:  Microb Ecol       Date:  2017-01-30       Impact factor: 4.552

3.  Latitudinal gradient of cyanobacterial diversity in tidal flats.

Authors:  Janina C Vogt; Raeid M M Abed; Dirk C Albach; Katarzyna A Palinska
Journal:  PLoS One       Date:  2019-11-13       Impact factor: 3.240

4.  Microbial communities of the Mediterranean rocky shore: ecology and biotechnological potential of the sea-land transition.

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