Literature DB >> 26046443

The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells.

Fan Guo1, Liying Yan2, Hongshan Guo1, Lin Li1, Boqiang Hu1, Yangyu Zhao2, Jun Yong1, Yuqiong Hu3, Xiaoye Wang2, Yuan Wei2, Wei Wang2, Rong Li2, Jie Yan2, Xu Zhi2, Yan Zhang2, Hongyan Jin2, Wenxin Zhang2, Yu Hou1, Ping Zhu4, Jingyun Li4, Ling Zhang5, Sirui Liu5, Yixin Ren2, Xiaohui Zhu2, Lu Wen6, Yi Qin Gao5, Fuchou Tang7, Jie Qiao8.   

Abstract

Germ cells are vital for transmitting genetic information from one generation to the next and for maintaining the continuation of species. Here, we analyze the transcriptome of human primordial germ cells (PGCs) from the migrating stage to the gonadal stage at single-cell and single-base resolutions. Human PGCs show unique transcription patterns involving the simultaneous expression of both pluripotency genes and germline-specific genes, with a subset of them displaying developmental-stage-specific features. Furthermore, we analyze the DNA methylome of human PGCs and find global demethylation of their genomes. Approximately 10 to 11 weeks after gestation, the PGCs are nearly devoid of any DNA methylation, with only 7.8% and 6.0% of the median methylation levels in male and female PGCs, respectively. Our work paves the way toward deciphering the complex epigenetic reprogramming of the germline with the aim of restoring totipotency in fertilized oocytes.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26046443     DOI: 10.1016/j.cell.2015.05.015

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  189 in total

1.  Germ stem cells are active in postnatal mouse ovary under physiological conditions.

Authors:  Kun Guo; Chao-Hui Li; Xin-Yi Wang; Da-Jian He; Ping Zheng
Journal:  Mol Hum Reprod       Date:  2016-02-24       Impact factor: 4.025

2.  Cigarette smoking significantly alters sperm DNA methylation patterns.

Authors:  T G Jenkins; E R James; D F Alonso; J R Hoidal; P J Murphy; J M Hotaling; B R Cairns; D T Carrell; K I Aston
Journal:  Andrology       Date:  2017-09-26       Impact factor: 3.842

Review 3.  Making headway towards understanding how epigenetic mechanisms contribute to early-life effects.

Authors:  Maja Vukic; Haoyu Wu; Lucia Daxinger
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-04-15       Impact factor: 6.237

4.  Developing differences: early-life effects and evolutionary medicine.

Authors:  Bram Kuijper; Mark A Hanson; Emma I K Vitikainen; Harry H Marshall; Susan E Ozanne; Michael A Cant
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-04-15       Impact factor: 6.237

Review 5.  Epigenetic changes in mammalian gametes throughout their lifetime: the four seasons metaphor.

Authors:  Peera Wasserzug-Pash; Michael Klutstein
Journal:  Chromosoma       Date:  2019-04-27       Impact factor: 4.316

6.  Single-cell joint detection of chromatin occupancy and transcriptome enables higher-dimensional epigenomic reconstructions.

Authors:  Haiqing Xiong; Yingjie Luo; Qianhao Wang; Xianhong Yu; Aibin He
Journal:  Nat Methods       Date:  2021-05-06       Impact factor: 28.547

7.  Accurate annotation of accessible chromatin in mouse and human primordial germ cells.

Authors:  Jingyi Li; Shijun Shen; Jiayu Chen; Wenqiang Liu; Xiaocui Li; Qianshu Zhu; Beiying Wang; Xiaolong Chen; Li Wu; Mingzhu Wang; Liang Gu; Hong Wang; Jiqing Yin; Cizhong Jiang; Shaorong Gao
Journal:  Cell Res       Date:  2018-10-10       Impact factor: 25.617

8.  Heterogeneity of transposon expression and activation of the repressive network in human fetal germ cells.

Authors:  Boris Reznik; Steven A Cincotta; Rebecca G Jaszczak; Leslie J Mateo; Joel Shen; Mei Cao; Laurence Baskin; Ping Ye; Wenfeng An; Diana J Laird
Journal:  Development       Date:  2019-02-01       Impact factor: 6.868

Review 9.  Modeling human infertility with pluripotent stem cells.

Authors:  Di Chen; Joanna J Gell; Yu Tao; Enrique Sosa; Amander T Clark
Journal:  Stem Cell Res       Date:  2017-04-13       Impact factor: 2.020

10.  Long-term expansion with germline potential of human primordial germ cell-like cells in vitro.

Authors:  Yusuke Murase; Yukihiro Yabuta; Hiroshi Ohta; Chika Yamashiro; Tomonori Nakamura; Takuya Yamamoto; Mitinori Saitou
Journal:  EMBO J       Date:  2020-09-20       Impact factor: 11.598

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