Literature DB >> 26045157

Pyrosequencing-Based Assessment of the Microbial Community Structure of Pastoruri Glacier Area (Huascarán National Park, Perú), a Natural Extreme Acidic Environment.

Elena González-Toril1, Esther Santofimia2, Yolanda Blanco1, Enrique López-Pamo2, Manuel J Gómez1, Miguel Bobadilla3, Rolando Cruz4, Edwin Julio Palomino4, Ángeles Aguilera5.   

Abstract

The exposure of fresh sulfide-rich lithologies by the retracement of the Nevado Pastoruri glacier (Central Andes, Perú) is increasing the presence of heavy metals in the water as well as decreasing the pH, producing an acid rock drainage (ARD) process in the area. We describe the microbial communities of an extreme ARD site in Huascarán National Park as well as their correlation with the water physicochemistry. Microbial biodiversity was analyzed by FLX 454 sequencing of the 16S rRNA gene. The suggested geomicrobiological model of the area distinguishes three different zones. The proglacial zone is located in the upper part of the valley, where the ARD process is not evident yet. Most of the OTUs detected in this area were related to sequences associated with cold environments (i.e., psychrotolerant species of Cyanobacteria or Bacteroidetes). After the proglacial area, an ARD-influenced zone appeared, characterized by the presence of phylotypes related to acidophiles (Acidiphilium) as well as other species related to acidic and cold environments (i.e., acidophilic species of Chloroflexi, Clostridium and Verrumicrobia). Sulfur- and iron-oxidizing acidophilic bacteria (Acidithiobacillus) were also identified. The post-ARD area was characterized by the presence of OTUs related to microorganisms detected in soils, permafrost, high mountain environments, and deglaciation areas (Sphingomonadales, Caulobacter or Comamonadaceae).

Entities:  

Keywords:  Acid rock drainage; Acidophiles; Extreme environments; Extremophiles; Massive sequencing

Mesh:

Substances:

Year:  2015        PMID: 26045157     DOI: 10.1007/s00248-015-0634-3

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  31 in total

1.  Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB.

Authors:  T Z DeSantis; P Hugenholtz; N Larsen; M Rojas; E L Brodie; K Keller; T Huber; D Dalevi; P Hu; G L Andersen
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

2.  Neutralization/prevention of acid rock drainage using mixtures of alkaline by-products and sulfidic mine wastes.

Authors:  Lena Alakangas; Elin Andersson; Seth Mueller
Journal:  Environ Sci Pollut Res Int       Date:  2013-06-06       Impact factor: 4.223

3.  Spatial and temporal analysis of the microbial community in the tailings of a Pb-Zn mine generating acidic drainage.

Authors:  Li-Nan Huang; Wen-Hua Zhou; Kevin B Hallberg; Cai-Yun Wan; Jie Li; Wen-Sheng Shu
Journal:  Appl Environ Microbiol       Date:  2011-06-24       Impact factor: 4.792

4.  Bacterial and archaeal diversity in sediments of west Lake Bonney, McMurdo Dry Valleys, Antarctica.

Authors:  Chao Tang; Michael T Madigan; Brian Lanoil
Journal:  Appl Environ Microbiol       Date:  2012-11-26       Impact factor: 4.792

5.  Functional shifts in unvegetated, perhumid, recently-deglaciated soils do not correlate with shifts in soil bacterial community composition.

Authors:  Sarah R Sattin; Cory C Cleveland; Eran Hood; Sasha C Reed; Andrew J King; Steven K Schmidt; Michael S Robeson; Nataly Ascarrunz; Diana R Nemergut
Journal:  J Microbiol       Date:  2010-02-04       Impact factor: 3.422

6.  Ironing out the wrinkles in the rare biosphere through improved OTU clustering.

Authors:  Susan M Huse; David Mark Welch; Hilary G Morrison; Mitchell L Sogin
Journal:  Environ Microbiol       Date:  2010-03-11       Impact factor: 5.491

7.  Acidithiobacillus ferrivorans, sp. nov.; facultatively anaerobic, psychrotolerant iron-, and sulfur-oxidizing acidophiles isolated from metal mine-impacted environments.

Authors:  Kevin B Hallberg; Elena González-Toril; D Barrie Johnson
Journal:  Extremophiles       Date:  2009-09-29       Impact factor: 2.395

8.  Metallibacterium scheffleri gen. nov., sp. nov., an alkalinizing gammaproteobacterium isolated from an acidic biofilm.

Authors:  Sibylle Ziegler; Barbara Waidner; Takashi Itoh; Peter Schumann; Stefan Spring; Johannes Gescher
Journal:  Int J Syst Evol Microbiol       Date:  2012-08-03       Impact factor: 2.747

9.  Insights into the structure and metabolic function of microbes that shape pelagic iron-rich aggregates ("iron snow").

Authors:  Shipeng Lu; Karuna Chourey; Marco Reiche; Sandor Nietzsche; Manesh B Shah; Thomas R Neu; Robert L Hettich; Kirsten Küsel
Journal:  Appl Environ Microbiol       Date:  2013-05-03       Impact factor: 4.792

10.  Microbial ecology of an extreme acidic environment, the Tinto River.

Authors:  E González-Toril; E Llobet-Brossa; E O Casamayor; R Amann; R Amils
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

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  4 in total

1.  Pristine but metal-rich Río Sucio (Dirty River) is dominated by Gallionella and other iron-sulfur oxidizing microbes.

Authors:  Alejandro Arce-Rodríguez; Fernando Puente-Sánchez; Roberto Avendaño; Eduardo Libby; Leonardo Rojas; Juan Carlos Cambronero; Dietmar H Pieper; Kenneth N Timmis; Max Chavarría
Journal:  Extremophiles       Date:  2016-12-08       Impact factor: 2.395

2.  Acid rock drainage in Nevado Pastoruri glacier area (Huascarán National Park, Perú): hydrochemical and mineralogical characterization and associated environmental implications.

Authors:  Esther Santofimia; Enrique López-Pamo; Edwin Julio Palomino; Elena González-Toril; Ángeles Aguilera
Journal:  Environ Sci Pollut Res Int       Date:  2017-09-19       Impact factor: 4.223

3.  Rock glaciers in crystalline catchments: Hidden permafrost-related threats to alpine headwater lakes.

Authors:  Boris P Ilyashuk; Elena A Ilyashuk; Roland Psenner; Richard Tessadri; Karin A Koinig
Journal:  Glob Chang Biol       Date:  2017-12-04       Impact factor: 10.863

4.  Clean Low-Biomass Procedures and Their Application to Ancient Ice Core Microorganisms.

Authors:  Zhi-Ping Zhong; Natalie E Solonenko; Maria C Gazitúa; Donald V Kenny; Ellen Mosley-Thompson; Virginia I Rich; James L Van Etten; Lonnie G Thompson; Matthew B Sullivan
Journal:  Front Microbiol       Date:  2018-05-25       Impact factor: 5.640

  4 in total

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