Literature DB >> 26044616

Complete genome of Kangiella geojedonensis KCTC 23420(T), putative evidence for recent genome reduction in marine environments.

Hanna Choe1, Seil Kim2, Jeongsu Oh1, Arshan Nasir3, Byung Kwon Kim4, Kyung Mo Kim5.   

Abstract

Kangiella geojedonensis KCTC 23420(T) is an aerobic, Gram-negative, non-motile, non-spore-forming, rod-shaped bacterium that was isolated from seawater off the southern coast of Korea. We here report the complete genome of K. geojedonensis KCTC 23420(T), which consists of 2,495,242 bp (G+C content of 43.78%) with 2,257 protein-coding genes, 41 tRNAs, 2 rRNA operons. The genome is smaller than the other closely related genomes, indicating that K. geojedonensis has recently experienced reductive evolution.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Complete genome; Genome reduction; Kangiella geojedonensis; Marine bacterium

Mesh:

Year:  2015        PMID: 26044616     DOI: 10.1016/j.margen.2015.05.015

Source DB:  PubMed          Journal:  Mar Genomics        ISSN: 1874-7787            Impact factor:   1.710


  5 in total

1.  Opportunistic bacteria with reduced genomes are effective competitors for organic nitrogen compounds in coastal dinoflagellate blooms.

Authors:  Yu Han; Nianzhi Jiao; Yao Zhang; Fan Zhang; Chen He; Xuejiao Liang; Ruanhong Cai; Quan Shi; Kai Tang
Journal:  Microbiome       Date:  2021-03-24       Impact factor: 14.650

2.  Bacterial Succession on Sinking Particles in the Ocean's Interior.

Authors:  Erik A Pelve; Kristina M Fontanez; Edward F DeLong
Journal:  Front Microbiol       Date:  2017-11-24       Impact factor: 5.640

3.  Genome Sequence of the Halophilic Bacterium Kangiella spongicola ATCC BAA-2076T.

Authors:  Aria Underriner; Tyler Silverwood; Carolyn Kelley; Kyle S MacLea
Journal:  Microbiol Resour Announc       Date:  2018-07-19

4.  Trophic Specialization Results in Genomic Reduction in Free-Living Marine Idiomarina Bacteria.

Authors:  Qi-Long Qin; Yi Li; Lin-Lin Sun; Zhi-Bin Wang; Shi Wang; Xiu-Lan Chen; Aharon Oren; Yu-Zhong Zhang
Journal:  mBio       Date:  2019-01-15       Impact factor: 7.867

5.  Comparative Genomics Reveals Evidence of Genome Reduction and High Extracellular Protein Degradation Potential in Kangiella.

Authors:  Jiahua Wang; Ye Lu; Muhammad Z Nawaz; Jun Xu
Journal:  Front Microbiol       Date:  2018-06-07       Impact factor: 5.640

  5 in total

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