Literature DB >> 26040579

Sphingopyxis fribergensis sp. nov., a soil bacterium with the ability to degrade styrene and phenylacetic acid.

Michel Oelschlägel1, Christian Rückert2, Jörn Kalinowski2, Gert Schmidt3, Michael Schlömann1, Dirk Tischler1.   

Abstract

Strain Kp5.2(T) is an aerobic, Gram-negative soil bacterium that was isolated in Freiberg, Saxony, Germany. The cells were motile and rod-shaped. Optimal growth was observed at 20-30 °C. The fatty acids of strain Kp5.2(T) comprised mainly C18 : 1ω7c and summed feature 3 (C16 : 1ω7c/iso-C15 : 0 2-OH). The major respiratory quinone was Q-10. The major polar lipids of strain Kp5.2(T) were phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine and sphingoglycolipid. The G+C content of the genomic DNA was 63.7%. Sequencing of the 16S rRNA gene of strain Kp5.2(T) allowed its classification into the family Sphingomonadaceae, and the sequence showed the highest similarity to those of members of the genus Sphingopyxis, with Sphingopyxis italica SC13E-S71(T) (99.15% similarity), Sphingopyxis panaciterrae Gsoil 124(T) (98.96%), Sphingopyxis chilensis S37(T) (98.90%) and Sphingopyxis bauzanensis BZ30(T) (98.51%) as the nearest neighbours. DNA-DNA hybridization and further characterization revealed that strain Kp5.2(T) can be considered to represent a novel species of the genus Sphingopyxis. Hence, the name Sphingopyxis fribergensis sp. nov. is proposed, with the type strain Kp5.2(T) ( = DSM 28731(T) = LMG 28478(T)).

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26040579     DOI: 10.1099/ijs.0.000371

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  7 in total

1.  Genomewide characterisation of the genetic diversity of carotenogenesis in bacteria of the order Sphingomonadales.

Authors:  Shivakumara Siddaramappa; Vandana Viswanathan; Saravanamuthu Thiyagarajan; Anushree Narjala
Journal:  Microb Genom       Date:  2018-04-05

2.  Culturing Bacteria From Fermentation Pit Muds of Baijiu With Culturomics and Amplicon-Based Metagenomic Approaches.

Authors:  Jialiang Xu; Leping Sun; Xuan Xing; Zhanbin Sun; Haoyue Gu; Xin Lu; Zhenpeng Li; Qing Ren
Journal:  Front Microbiol       Date:  2020-06-23       Impact factor: 5.640

3.  Genome-Wide Analysis Reveals Genetic Potential for Aromatic Compounds Biodegradation of Sphingopyxis.

Authors:  Fei Yang; Hai Feng; Isaac Yaw Massey; Feiyu Huang; Jian Guo; Xian Zhang
Journal:  Biomed Res Int       Date:  2020-05-27       Impact factor: 3.411

4.  Draft Genome Sequence of Two Sphingopyxis sp. Strains, Dominant Members of the Bacterial Community Associated with a Drinking Water Distribution System Simulator.

Authors:  Vicente Gomez-Alvarez; Stacy Pfaller; Randy P Revetta
Journal:  Genome Announc       Date:  2016-03-31

5.  Genomic analysis of the nitrate-respiring Sphingopyxis granuli (formerly Sphingomonas macrogoltabida) strain TFA.

Authors:  Inmaculada García-Romero; Antonio J Pérez-Pulido; Yolanda Elisabet González-Flores; Francisca Reyes-Ramírez; Eduardo Santero; Belén Floriano
Journal:  BMC Genomics       Date:  2016-02-04       Impact factor: 3.969

6.  Genomic Analysis of γ-Hexachlorocyclohexane-Degrading Sphingopyxis lindanitolerans WS5A3p Strain in the Context of the Pangenome of Sphingopyxis.

Authors:  Michal A Kaminski; Adam Sobczak; Andrzej Dziembowski; Leszek Lipinski
Journal:  Genes (Basel)       Date:  2019-09-06       Impact factor: 4.096

7.  Biochemical Characterization of Phenylacetaldehyde Dehydrogenases from Styrene-degrading Soil Bacteria.

Authors:  Juliane Zimmerling; Michel Oelschlägel; Carolin Großmann; Matthias Voitel; Michael Schlömann; Dirk Tischler
Journal:  Appl Biochem Biotechnol       Date:  2020-10-27       Impact factor: 2.926

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.