Literature DB >> 26038983

W8, a new Sup35 prion strain, transmits distinctive information with a conserved assembly scheme.

Yu-Wen Huang1, Yuan-Chih Chang, Ruben Diaz-Avalos, Chih-Yen King.   

Abstract

Prion strains are different self-propagating conformers of the same infectious protein. Three strains of the [PSI] prion, infectious forms of the yeast Sup35 protein, have been previously characterized in our laboratory. Here we report the discovery of a new [PSI] strain, named W8. We demonstrate its robust cellular propagation as well as the protein-only transmission. To reveal strain-specific sequence requirement, mutations that interfered with the propagation of W8 were identified by consecutive substitution of residues 5-55 of Sup35 by proline and insertion of glycine at alternate sites in this segment. Interestingly, propagating W8 with single mutations at residues 5-7 and around residue 43 caused the strain to transmute. In contrast to the assertion that [PSI] existed as a dynamic cloud of sub-structures, no random drift in transmission characteristics was detected in mitotically propagated W8 populations. Electron diffraction and mass-per-length measurements indicate that, similar to the 3 previously characterized strains, W8 fibers are composed of about 1 prion molecule per 4.7-Å cross-β repeat period. Thus differently folded single Sup35 molecules, not dimeric and trimeric assemblies, form the basic repeating units to build the 4 [PSI] strains.

Entities:  

Keywords:  5-FOA, 5-fluoroorotic acid; Aβ, amyloid β-protein; GFP, green fluorescent protein; PrP, prion protein; SC, synthetic complete; STEM, scanning transmission electron microscopy; YPD, yeast extract, peptone, dextrose; amyloid, prion strain, [PSI+], SUP35, yeast; mpl, mass per length

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Year:  2015        PMID: 26038983      PMCID: PMC4601305          DOI: 10.1080/19336896.2015.1039217

Source DB:  PubMed          Journal:  Prion        ISSN: 1933-6896            Impact factor:   3.931


  51 in total

1.  The PNM2 mutation in the prion protein domain of SUP35 has distinct effects on different variants of the [PSI+] prion in yeast.

Authors:  I L Derkatch; M E Bradley; P Zhou; S W Liebman
Journal:  Curr Genet       Date:  1999-03       Impact factor: 3.886

2.  Cryo-electron microscopy structure of an SH3 amyloid fibril and model of the molecular packing.

Authors:  J L Jiménez; J I Guijarro; E Orlova; J Zurdo; C M Dobson; M Sunde; H R Saibil
Journal:  EMBO J       Date:  1999-02-15       Impact factor: 11.598

3.  Getting started with yeast.

Authors:  F Sherman
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

4.  Strain-specific morphologies of yeast prion amyloid fibrils.

Authors:  Ruben Diaz-Avalos; Chih-Yen King; Joseph Wall; Martha Simon; Donald L D Caspar
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-08       Impact factor: 11.205

5.  Comparison of Alzheimer Abeta(1-40) and Abeta(1-42) amyloid fibrils reveals similar protofilament structures.

Authors:  Matthias Schmidt; Carsten Sachse; Walter Richter; Chen Xu; Marcus Fändrich; Nikolaus Grigorieff
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-20       Impact factor: 11.205

6.  A new efficient gene disruption cassette for repeated use in budding yeast.

Authors:  U Güldener; S Heck; T Fielder; J Beinhauer; J H Hegemann
Journal:  Nucleic Acids Res       Date:  1996-07-01       Impact factor: 16.971

7.  Role of the chaperone protein Hsp104 in propagation of the yeast prion-like factor [psi+].

Authors:  Y O Chernoff; S L Lindquist; B Ono; S G Inge-Vechtomov; S W Liebman
Journal:  Science       Date:  1995-05-12       Impact factor: 47.728

8.  Genesis and variability of [PSI] prion factors in Saccharomyces cerevisiae.

Authors:  I L Derkatch; Y O Chernoff; V V Kushnirov; S G Inge-Vechtomov; S W Liebman
Journal:  Genetics       Date:  1996-12       Impact factor: 4.562

9.  The yeast non-Mendelian factor [ETA+] is a variant of [PSI+], a prion-like form of release factor eRF3.

Authors:  P Zhou; I L Derkatch; S M Uptain; M M Patino; S Lindquist; S W Liebman
Journal:  EMBO J       Date:  1999-03-01       Impact factor: 11.598

10.  The SUP35 omnipotent suppressor gene is involved in the maintenance of the non-Mendelian determinant [psi+] in the yeast Saccharomyces cerevisiae.

Authors:  M D Ter-Avanesyan; A R Dagkesamanskaya; V V Kushnirov; V N Smirnov
Journal:  Genetics       Date:  1994-07       Impact factor: 4.562

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  4 in total

1.  Strain conformation controls the specificity of cross-species prion transmission in the yeast model.

Authors:  Anastasia V Grizel; Aleksandr A Rubel; Yury O Chernoff
Journal:  Prion       Date:  2016-07-03       Impact factor: 3.931

2.  Amino Acid Proximities in Two Sup35 Prion Strains Revealed by Chemical Cross-linking.

Authors:  Shenq-Huey Wong; Chih-Yen King
Journal:  J Biol Chem       Date:  2015-08-11       Impact factor: 5.157

3.  Contributions of the Prion Protein Sequence, Strain, and Environment to the Species Barrier.

Authors:  Aditi Sharma; Kathryn L Bruce; Buxin Chen; Stefka Gyoneva; Sven H Behrens; Andreas S Bommarius; Yury O Chernoff
Journal:  J Biol Chem       Date:  2015-11-12       Impact factor: 5.157

Review 4.  Amyloid Fragmentation and Disaggregation in Yeast and Animals.

Authors:  Vitaly V Kushnirov; Alexander A Dergalev; Alexander I Alexandrov
Journal:  Biomolecules       Date:  2021-12-15
  4 in total

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