Literature DB >> 26038558

Rodent reservoirs of future zoonotic diseases.

Barbara A Han1, John Paul Schmidt2, Sarah E Bowden2, John M Drake2.   

Abstract

The increasing frequency of zoonotic disease events underscores a need to develop forecasting tools toward a more preemptive approach to outbreak investigation. We apply machine learning to data describing the traits and zoonotic pathogen diversity of the most speciose group of mammals, the rodents, which also comprise a disproportionate number of zoonotic disease reservoirs. Our models predict reservoir status in this group with over 90% accuracy, identifying species with high probabilities of harboring undiscovered zoonotic pathogens based on trait profiles that may serve as rules of thumb to distinguish reservoirs from nonreservoir species. Key predictors of zoonotic reservoirs include biogeographical properties, such as range size, as well as intrinsic host traits associated with lifetime reproductive output. Predicted hotspots of novel rodent reservoir diversity occur in the Middle East and Central Asia and the Midwestern United States.

Entities:  

Keywords:  disease forecasting; generalized boosted regression trees; machine learning; pace-of-life hypothesis; prediction

Mesh:

Year:  2015        PMID: 26038558      PMCID: PMC4460448          DOI: 10.1073/pnas.1501598112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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