Literature DB >> 26034888

The Balbiani Ring Story: Synthesis, Assembly, Processing, and Transport of Specific Messenger RNA-Protein Complexes.

Petra Björk1, Lars Wieslander.   

Abstract

Eukaryotic gene expression is the result of the integrated action of multimolecular machineries. These machineries associate with gene transcripts, often already nascent precursor messenger RNAs (pre-mRNAs). They rebuild the transcript and convey properties allowing the processed transcript, the mRNA, to be exported to the cytoplasm, quality controlled, stored, translated, and degraded. To understand these integrated processes, one must understand the temporal and spatial aspects of the fate of the gene transcripts in relation to interacting molecular machineries. Improved methodology is necessary to study gene expression in vivo for endogenous genes. A complementary approach is to study biological systems that provide exceptional experimental possibilities. We describe such a system, the Balbiani ring (BR) genes in polytene cells in the dipteran Chironomus tentans. The BR genes, along with their pre-mRNA-protein complexes (pre-mRNPs) and mRNA-protein complexes (mRNPs), allow the visualization of intact cell nuclei and enable analyses of where and when different molecular machineries associate with and act on the BR pre-mRNAs and mRNAs.

Entities:  

Keywords:  gene expression; mRNA export; pre-mRNA processing; structure of mRNPs

Mesh:

Substances:

Year:  2015        PMID: 26034888     DOI: 10.1146/annurev-biochem-060614-034150

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  7 in total

Review 1.  Nascent RNA and the Coordination of Splicing with Transcription.

Authors:  Karla M Neugebauer
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-08-01       Impact factor: 10.005

Review 2.  Perfect timing: splicing and transcription rates in living cells.

Authors:  Tara Alpert; Lydia Herzel; Karla M Neugebauer
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-11-21       Impact factor: 9.957

3.  Spatial organization of transcribed eukaryotic genes.

Authors:  Johannes Ribisel; Simon Ullrich; Susanne Leidescher; Yana Feodorova; Erica Hildebrand; Alexandra Galitsyna; Sebastian Bultmann; Stephanie Link; Katharina Thanisch; Christopher Mulholland; Job Dekker; Heinrich Leonhardt; Leonid Mirny; Irina Solovei
Journal:  Nat Cell Biol       Date:  2022-02-17       Impact factor: 28.213

4.  CoBold: a method for identifying different functional classes of transient RNA structure features that can impact RNA structure formation in vivo.

Authors:  Adrián López Martín; Mohamed Mounir; Irmtraud M Meyer
Journal:  Nucleic Acids Res       Date:  2021-02-26       Impact factor: 16.971

Review 5.  Integration of mRNP formation and export.

Authors:  Petra Björk; Lars Wieslander
Journal:  Cell Mol Life Sci       Date:  2017-03-17       Impact factor: 9.261

6.  Fiber-Like Organization as a Basic Principle for Euchromatin Higher-Order Structure.

Authors:  Amir N Zakirov; Sophie Sosnovskaya; Ekaterina D Ryumina; Ekaterina Kharybina; Olga S Strelkova; Oxana A Zhironkina; Sergei A Golyshev; Andrey Moiseenko; Igor I Kireev
Journal:  Front Cell Dev Biol       Date:  2022-01-31

Review 7.  The role of TREX in gene expression and disease.

Authors:  Catherine G Heath; Nicolas Viphakone; Stuart A Wilson
Journal:  Biochem J       Date:  2016-10-01       Impact factor: 3.857

  7 in total

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