Literature DB >> 26032887

The Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN) data repository.

David D Shin1, I Burak Ozyurt2, Gregory G Brown2, Christine Fennema-Notestine2, Thomas T Liu3.   

Abstract

Arterial spin labeling (ASL) MRI provides an accurate and reliable measure of cerebral blood flow (CBF). A rapidly growing number of CBF measures are being collected both in clinical and research settings around the world, resulting in a large volume of data across a wide spectrum of study populations and health conditions. Here, we describe a central CBF data repository with integrated processing workflows, referred to as the Cerebral Blood Flow Biomedical Informatics Research Network (CBFBIRN). The CBFBIRN provides an integrated framework for the analysis and comparison of CBF measures across studies and sites. In this work, we introduce the main capabilities of the CBFBIRN (data storage, processing, and sharing), describe what types of data are available, explain how users can contribute to the data repository and access existing data from it, and discuss our long-term plans for the CBFBIRN.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26032887      PMCID: PMC4651708          DOI: 10.1016/j.neuroimage.2015.05.059

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  15 in total

Review 1.  Blood flow imaging of the brain: 50 years experience.

Authors:  Katherine H Taber; Kevin J Black; Robin A Hurley
Journal:  J Neuropsychiatry Clin Neurosci       Date:  2005       Impact factor: 2.198

Review 2.  Comparative overview of brain perfusion imaging techniques.

Authors:  M Wintermark; M Sesay; E Barbier; K Borbély; W P Dillon; J D Eastwood; T C Glenn; C B Grandin; S Pedraza; J F Soustiel; T Nariai; G Zaharchuk; J M Caillé; V Dousset; H Yonas
Journal:  J Neuroradiol       Date:  2005-12       Impact factor: 3.447

Review 3.  Function biomedical informatics research network recommendations for prospective multicenter functional MRI studies.

Authors:  Gary H Glover; Bryon A Mueller; Jessica A Turner; Theo G M van Erp; Thomas T Liu; Douglas N Greve; James T Voyvodic; Jerod Rasmussen; Gregory G Brown; David B Keator; Vince D Calhoun; Hyo Jong Lee; Judith M Ford; Daniel H Mathalon; Michele Diaz; Daniel S O'Leary; Syam Gadde; Adrian Preda; Kelvin O Lim; Cynthia G Wible; Hal S Stern; Aysenil Belger; Gregory McCarthy; Burak Ozyurt; Steven G Potkin
Journal:  J Magn Reson Imaging       Date:  2012-02-07       Impact factor: 4.813

4.  Measurement of cerebral perfusion with arterial spin labeling: Part 2. Applications.

Authors:  Gregory G Brown; Camellia Clark; Thomas T Liu
Journal:  J Int Neuropsychol Soc       Date:  2007-05       Impact factor: 2.892

5.  Perfusion imaging by a flow-sensitive alternating inversion recovery (FAIR) technique: application to functional brain imaging.

Authors:  S G Kim; N V Tsekos
Journal:  Magn Reson Med       Date:  1997-03       Impact factor: 4.668

Review 6.  Making big data open: data sharing in neuroimaging.

Authors:  Russell A Poldrack; Krzysztof J Gorgolewski
Journal:  Nat Neurosci       Date:  2014-10-28       Impact factor: 24.884

7.  Federated web-accessible clinical data management within an extensible neuroimaging database.

Authors:  I Burak Ozyurt; David B Keator; Dingying Wei; Christine Fennema-Notestine; Karen R Pease; Jeremy Bockholt; Jeffrey S Grethe
Journal:  Neuroinformatics       Date:  2010-12

8.  Effect of mild cognitive impairment and APOE genotype on resting cerebral blood flow and its association with cognition.

Authors:  Christina E Wierenga; Sheena I Dev; David D Shin; Lindsay R Clark; Katherine J Bangen; Amy J Jak; Robert A Rissman; Thomas T Liu; David P Salmon; Mark W Bondi
Journal:  J Cereb Blood Flow Metab       Date:  2012-05-02       Impact factor: 6.200

9.  Continuous flow-driven inversion for arterial spin labeling using pulsed radio frequency and gradient fields.

Authors:  Weiying Dai; Dairon Garcia; Cedric de Bazelaire; David C Alsop
Journal:  Magn Reson Med       Date:  2008-12       Impact factor: 4.668

Review 10.  Recommended implementation of arterial spin-labeled perfusion MRI for clinical applications: A consensus of the ISMRM perfusion study group and the European consortium for ASL in dementia.

Authors:  David C Alsop; John A Detre; Xavier Golay; Matthias Günther; Jeroen Hendrikse; Luis Hernandez-Garcia; Hanzhang Lu; Bradley J MacIntosh; Laura M Parkes; Marion Smits; Matthias J P van Osch; Danny J J Wang; Eric C Wong; Greg Zaharchuk
Journal:  Magn Reson Med       Date:  2014-04-08       Impact factor: 4.668

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  2 in total

1.  ASL-MRICloud: An online tool for the processing of ASL MRI data.

Authors:  Yang Li; Peiying Liu; Yue Li; Hongli Fan; Pan Su; Shin-Lei Peng; Denise C Park; Karen M Rodrigue; Hangyi Jiang; Andreia V Faria; Can Ceritoglu; Michael Miller; Susumu Mori; Hanzhang Lu
Journal:  NMR Biomed       Date:  2018-12-26       Impact factor: 4.044

2.  The effects of nicotine and cannabis co-use during adolescence and young adulthood on white matter cerebral blood flow estimates.

Authors:  Kelly E Courtney; Rachel Baca; Neal Doran; Aaron Jacobson; Thomas T Liu; Joanna Jacobus
Journal:  Psychopharmacology (Berl)       Date:  2020-08-15       Impact factor: 4.530

  2 in total

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