Literature DB >> 26032250

Discovery and characterization of thermophilic limonene-1,2-epoxide hydrolases from hot spring metagenomic libraries.

Erica Elisa Ferrandi1,2, Christopher Sayer3, Michail N Isupov3, Celeste Annovazzi1, Carlotta Marchesi1, Gianluca Iacobone1, Xu Peng2, Elizaveta Bonch-Osmolovskaya4, Roland Wohlgemuth5, Jennifer A Littlechild3, Daniela Monti1.   

Abstract

The epoxide hydrolases (EHs) represent an attractive option for the synthesis of chiral epoxides and 1,2-diols which are valuable building blocks for the synthesis of several pharmaceutical compounds. A metagenomic approach has been used to identify two new members of the atypical EH limonene-1,2-epoxide hydrolase (LEH) family of enzymes. These two LEHs (Tomsk-LEH and CH55-LEH) show EH activities towards different epoxide substrates, differing in most cases from those previously identified for Rhodococcus erythropolis (Re-LEH) in terms of stereoselectivity. Tomsk-LEH and CH55-LEH, both from thermophilic sources, have higher optimal temperatures and apparent melting temperatures than Re-LEH. The new LEH enzymes have been crystallized and their structures solved to high resolution in the native form and in complex with the inhibitor valpromide for Tomsk-LEH and poly(ethylene glycol) for CH55-LEH. The structural analysis has provided insights into the LEH mechanism, substrate specificity and stereoselectivity of these new LEH enzymes, which has been supported by mutagenesis studies.
© 2015 FEBS.

Entities:  

Keywords:  industrial biocatalysis; limonene-1,2-epoxide hydrolases; metagenomics; protein structure; stereoselectivity

Mesh:

Substances:

Year:  2015        PMID: 26032250     DOI: 10.1111/febs.13328

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  11 in total

Review 1.  Metagenomics of Thermophiles with a Focus on Discovery of Novel Thermozymes.

Authors:  María-Eugenia DeCastro; Esther Rodríguez-Belmonte; María-Isabel González-Siso
Journal:  Front Microbiol       Date:  2016-09-27       Impact factor: 5.640

2.  Metagenomic Analysis of Hot Springs in Central India Reveals Hydrocarbon Degrading Thermophiles and Pathways Essential for Survival in Extreme Environments.

Authors:  Rituja Saxena; Darshan B Dhakan; Parul Mittal; Prashant Waiker; Anirban Chowdhury; Arundhuti Ghatak; Vineet K Sharma
Journal:  Front Microbiol       Date:  2017-01-05       Impact factor: 5.640

Review 3.  Improving the 'tool box' for robust industrial enzymes.

Authors:  J A Littlechild
Journal:  J Ind Microbiol Biotechnol       Date:  2017-04-11       Impact factor: 3.346

4.  Significant improvement in catalytic activity and enantioselectivity of a Phaseolus vulgaris epoxide hydrolase, PvEH3, towards ortho-cresyl glycidyl ether based on the semi-rational design.

Authors:  Chen Zhang; Youyi Liu; Chuang Li; Yaohui Xu; Yongjun Su; Jinping Li; Jun Zhao; Minchen Wu
Journal:  Sci Rep       Date:  2020-02-03       Impact factor: 4.379

Review 5.  Bioprospecting of Novel Extremozymes From Prokaryotes-The Advent of Culture-Independent Methods.

Authors:  Maksim Sysoev; Stefan W Grötzinger; Dominik Renn; Jörg Eppinger; Magnus Rueping; Ram Karan
Journal:  Front Microbiol       Date:  2021-02-10       Impact factor: 5.640

Review 6.  Industrial Biotechnology Based on Enzymes From Extreme Environments.

Authors:  Noha M Mesbah
Journal:  Front Bioeng Biotechnol       Date:  2022-04-05

7.  The Structure of a Novel Thermophilic Esterase from the Planctomycetes Species, Thermogutta terrifontis Reveals an Open Active Site Due to a Minimal 'Cap' Domain.

Authors:  Christopher Sayer; Zalan Szabo; Michail N Isupov; Colin Ingham; Jennifer A Littlechild
Journal:  Front Microbiol       Date:  2015-11-23       Impact factor: 5.640

Review 8.  Enzymes from Extreme Environments and Their Industrial Applications.

Authors:  Jennifer A Littlechild
Journal:  Front Bioeng Biotechnol       Date:  2015-10-13

9.  New Thermophilic α/β Class Epoxide Hydrolases Found in Metagenomes From Hot Environments.

Authors:  Erica Elisa Ferrandi; Christopher Sayer; Simone Antonio De Rose; Elisa Guazzelli; Carlotta Marchesi; Vahid Saneei; Michail N Isupov; Jennifer A Littlechild; Daniela Monti
Journal:  Front Bioeng Biotechnol       Date:  2018-10-16

10.  Identification and catalytic properties of new epoxide hydrolases from the genomic data of soil bacteria.

Authors:  Gorjan Stojanovski; Dragana Dobrijevic; Helen C Hailes; John M Ward
Journal:  Enzyme Microb Technol       Date:  2020-05-12       Impact factor: 3.493

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