Literature DB >> 26030683

Applicability of integrated cell culture quantitative PCR (ICC-qPCR) for the detection of infectious adenovirus type 2 in UV disinfection studies.

Hodon Ryu1, Jennifer L Cashdollar, G Shay Fout, Karen A Schrantz, Samuel Hayes.   

Abstract

Practical difficulties of the traditional adenovirus infectivity assay such as intensive labor requirements and longer turnaround period limit the direct use of adenovirus as a testing microorganism for systematic, comprehensive disinfection studies. In this study, we attempted to validate the applicability of integrated cell culture quantitative PCR (ICC-qPCR) as an alternative to the traditional cell culture method with human adenovirus type 2 (HAdV2) in a low-pressure UV disinfection study and to further optimize the procedures of ICC-qPCR for 24-well plate format. The relatively high stability of the hexon gene of HAdV2 was observed after exposure to UV radiation, resulting in a maximum gene copy reduction of 0.5 log10 at 280 mJ cm(-2). Two-day post-inoculation incubation period and a maximum spiking level of 10(5) MPN mL(-1) were selected as optimum conditions of ICC-qPCR with the tested HAdV2. An approximate 1:1 correlation of virus quantities by the traditional and ICC-qPCR cell culture based methods suggested that ICC-qPCR is a satisfactory alternative for practical application in HAdV2 disinfection studies. ICC-qPCR results, coupled with a first-order kinetic model (i.e., the inactivation rate constant of 0.0232 cm(2) mJ(-1)), showed that an UV dose of 172 mJ cm(-2) achieved a 4-log inactivation credit for HAdV2. This estimate is comparable to other studies with HAdV2 and other adenovirus respiratory types. The newly optimized ICC-qPCR shows much promise for further study on its applicability of other slow replicating viruses in disinfection studies.

Entities:  

Keywords:  Integrated cell culture quantitative PCR; UV disinfection; adenovirus type 2

Mesh:

Year:  2015        PMID: 26030683     DOI: 10.1080/10934529.2015.1019795

Source DB:  PubMed          Journal:  J Environ Sci Health A Tox Hazard Subst Environ Eng        ISSN: 1093-4529            Impact factor:   2.269


  6 in total

1.  Evaluating UV-C LED disinfection performance and investigating potential dual-wavelength synergy.

Authors:  Sara E Beck; Hodon Ryu; Laura A Boczek; Jennifer L Cashdollar; Kaitlyn M Jeanis; James S Rosenblum; Oliver R Lawal; Karl G Linden
Journal:  Water Res       Date:  2016-11-07       Impact factor: 11.236

2.  Applicability of integrated cell culture reverse transcriptase quantitative PCR (ICC-RTqPCR) for the simultaneous detection of the four human enteric enterovirus species in disinfection studies.

Authors:  Hodon Ryu; Karen A Schrantz; Nichole E Brinkman; Laura A Boczek
Journal:  J Virol Methods       Date:  2018-05-17       Impact factor: 2.014

3.  Quantification of human adenovirus and norovirus in river water in the north-east of France.

Authors:  Maryse Iris Sedji; Mihayl Varbanov; Marie Meo; Marius Colin; Laurence Mathieu; Isabelle Bertrand
Journal:  Environ Sci Pollut Res Int       Date:  2018-08-30       Impact factor: 4.223

Review 4.  Advances in Diagnostic Approaches for Viral Etiologies of Diarrhea: From the Lab to the Field.

Authors:  Yashpal Singh Malik; Atul Kumar Verma; Naveen Kumar; Nadia Touil; Kumaragurubaran Karthik; Ruchi Tiwari; Durlav Prasad Bora; Kuldeep Dhama; Souvik Ghosh; Maged Gomaa Hemida; Ahmed S Abdel-Moneim; Krisztián Bányai; Anastasia N Vlasova; Nobumichi Kobayashi; Raj Kumar Singh
Journal:  Front Microbiol       Date:  2019-09-13       Impact factor: 5.640

Review 5.  New insights into application of nanoparticles in the diagnosis and screening of novel coronavirus (SARS-CoV-2).

Authors:  Abhimanyu Tharayil; R Rajakumari; Amresh Kumar; Manabendra Dutta Choudhary; Parth Palit; Sabu Thomas
Journal:  Emergent Mater       Date:  2021-03-31

6.  Understanding Microbial Loads in Wastewater Treatment Works as Source Water for Water Reuse.

Authors:  Hodon Ryu; Yao Addor; Nichole E Brinkman; Michael W Ware; Laura Boczek; Jill Hoelle; Jatin H Mistry; Scott P Keely; Eric N Villegas
Journal:  Water (Basel)       Date:  2021-05-21       Impact factor: 3.103

  6 in total

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