Literature DB >> 26029421

Crystal structure of {bis-[2-(3,5-di-methyl-pyrazol-1-yl-κN (2))eth-yl]amine-κN}chlorido-platinum(II) chloride dihydrate.

María de Los Angeles Mendoza1, Sylvain Bernès2, Guillermo Mendoza-Díaz1.   

Abstract

The title complex, [PtCl(C14H23N5)]Cl·2H2O, is isomorphous with the Pd(II) compound characterized previously [Mendoza, Bernès & Mendoza-Díaz (2006 ▶). Acta Cryst. E62, m2934-m2936]. The angle between pyrazole mean planes in the main ligand is 88.3 (4)°, similar to that observed in the Pd(II) analogue [87.62 (11)°]. This tridentate ligand adopts a conformation approximating a twofold symmetry, allowing its coordination to the metal atom, together with a chloride ligand, in an almost perfect square-planar geometry. A chloride anion and two water mol-ecules in the asymmetric unit form a hydrogen-bonded network connected to the complex mol-ecules in the crystal via the NH amine groups, forming chains along [100].

Entities:  

Keywords:  bis­(pyrazol-1-yl)amine; bis­[2-(3,5-di­methyl­pyrazol-1-yl)eth­yl]amine (pza) ligand; coordination compounds; crystal structure; platinum(II) complex

Year:  2015        PMID: 26029421      PMCID: PMC4438831          DOI: 10.1107/S2056989015005307

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the isomorphous PdII structure, see: Mendoza et al. (2006 ▸). For a pseudopolymorph of the PdII complex, see: Guzei et al. (2010 ▸). For other PdII and NiII complexes bearing the same bis­(pyrazol-1-yl)amine ligand, see: Mendoza et al. (2015 ▸); Ajellal et al. (2006 ▸); Massoud et al. (2012 ▸, 2013 ▸).

Experimental

Crystal data

[PtCl(C14H23N5)]Cl·2H2O M = 563.39 Monoclinic, a = 7.944 (4) Å b = 22.523 (4) Å c = 11.783 (2) Å β = 109.34 (2)° V = 1989.1 (11) Å3 Z = 4 Mo Kα radiation μ = 7.34 mm−1 T = 291 K 0.60 × 0.40 × 0.18 mm

Data collection

Bruker P4 diffractometer Absorption correction: part of the refinement model (ΔF) (Walker & Stuart, 1983 ▸) T min = 0.024, T max = 0.111 4492 measured reflections 3482 independent reflections 3032 reflections with I > 2σ(I) R int = 0.057 3 standard reflections every 97 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.138 S = 1.05 3482 reflections 233 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 2.96 e Å−3 Δρmin = −1.26 e Å−3

Data collection: XSCANS (Siemens, 1996 ▸); cell refinement: XSCANS; data reduction: XSCANS; program(s) used to solve structure: SHELXS2014 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: SHELXTL (Sheldrick, 2008 ▸) and Mercury (Macrae et al., 2008 ▸)’; software used to prepare material for publication: SHELXL2014. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S2056989015005307/hp2070sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015005307/hp2070Isup2.hkl Click here for additional data file. . DOI: 10.1107/S2056989015005307/hp2070fig1.tif View of the title complex, with displacement ellipsoids for non-H atoms at the 30% probability level. Click here for additional data file. . DOI: 10.1107/S2056989015005307/hp2070fig2.tif Part of the crystal structure of the title complex, emphasizing the hydrogen-bond network (dashed bonds). H atoms not involved in hydrogen bonds are omitted. CCDC reference: 1054111 Additional supporting information: crystallographic information; 3D view; checkCIF report
[PtCl(C14H23N5)]Cl·2H2OF(000) = 1096
Mr = 563.39Dx = 1.881 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 7.944 (4) ÅCell parameters from 74 reflections
b = 22.523 (4) Åθ = 4.6–12.5°
c = 11.783 (2) ŵ = 7.34 mm1
β = 109.34 (2)°T = 291 K
V = 1989.1 (11) Å3Irregular, yellow
Z = 40.60 × 0.40 × 0.18 mm
Bruker P4 diffractometer3032 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube, FN4Rint = 0.057
Graphite monochromatorθmax = 25.0°, θmin = 1.8°
2θ/ω scansh = −9→1
Absorption correction: part of the refinement model (ΔF) (Walker & Stuart, 1983)k = −26→1
Tmin = 0.024, Tmax = 0.111l = −13→14
4492 measured reflections3 standard reflections every 97 reflections
3482 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.138H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0808P)2 + 10.4703P] where P = (Fo2 + 2Fc2)/3
3482 reflections(Δ/σ)max = 0.001
233 parametersΔρmax = 2.96 e Å3
4 restraintsΔρmin = −1.26 e Å3
0 constraints
xyzUiso*/Ueq
Pt10.29461 (4)0.17362 (2)0.81174 (3)0.04691 (17)
Cl10.4903 (3)0.22408 (12)0.9706 (2)0.0666 (6)
Cl20.2473 (5)0.01323 (18)0.3417 (3)0.0959 (10)
N10.3971 (10)0.2093 (3)0.6922 (7)0.0529 (17)
N20.4257 (12)0.1738 (3)0.6053 (8)0.0557 (19)
C30.4939 (12)0.2055 (5)0.5363 (9)0.057 (2)
C40.5163 (14)0.2619 (5)0.5808 (9)0.064 (2)
H4A0.56590.29350.55220.077*
C50.4526 (13)0.2634 (4)0.6751 (9)0.059 (2)
C60.5244 (18)0.1798 (5)0.4275 (11)0.074 (3)
H6A0.58410.14230.44780.111*
H6B0.59680.20650.39990.111*
H6C0.41180.17420.36500.111*
C70.431 (2)0.3173 (5)0.7433 (12)0.080 (4)
H7A0.36080.30750.79300.121*
H7B0.37250.34800.68770.121*
H7C0.54650.33100.79300.121*
C80.3519 (13)0.1130 (5)0.5867 (10)0.060 (2)
H8A0.40910.08880.65700.073*
H8B0.37290.09490.51790.073*
C90.1509 (12)0.1172 (4)0.5650 (9)0.055 (2)
H9A0.10140.15080.51340.066*
H9B0.09230.08150.52470.066*
N100.1180 (10)0.1241 (3)0.6811 (7)0.0542 (18)
H10A0.12960.08760.71150.065*
N110.1783 (9)0.1329 (3)0.9188 (7)0.0512 (17)
N12−0.0039 (10)0.1288 (3)0.8745 (7)0.0530 (17)
C13−0.0607 (13)0.0933 (4)0.9487 (10)0.060 (2)
C140.0871 (13)0.0748 (5)1.0375 (10)0.064 (3)
H14A0.08930.05021.10130.077*
C150.2331 (12)0.0988 (4)1.0167 (8)0.053 (2)
C16−0.2500 (13)0.0794 (5)0.9250 (11)0.071 (3)
H16A−0.31430.11540.92610.107*
H16B−0.26130.05290.98600.107*
H16C−0.29820.06090.84760.107*
C170.4253 (14)0.0902 (6)1.0886 (10)0.071 (3)
H17A0.49550.12001.06690.106*
H17B0.46320.05161.07240.106*
H17C0.44090.09351.17270.106*
C18−0.1019 (13)0.1636 (4)0.7703 (10)0.060 (2)
H18A−0.06290.20470.78230.072*
H18B−0.22830.16240.75960.072*
C19−0.0704 (12)0.1391 (5)0.6588 (9)0.064 (3)
H19A−0.14260.10380.63220.077*
H19B−0.10810.16830.59480.077*
O10.6546 (14)0.0365 (5)0.3986 (10)0.093 (3)
H110.68 (2)0.026 (8)0.471 (6)0.139*
H120.543 (5)0.030 (8)0.373 (17)0.139*
O20.1596 (12)−0.0015 (4)0.7589 (8)0.076 (2)
H210.049 (5)−0.001 (7)0.722 (13)0.114*
H220.205 (17)−0.016 (7)0.710 (10)0.114*
U11U22U33U12U13U23
Pt10.0457 (2)0.0476 (2)0.0468 (3)−0.00155 (12)0.01444 (16)0.00047 (13)
Cl10.0658 (14)0.0665 (15)0.0609 (14)−0.0101 (12)0.0120 (11)−0.0062 (12)
Cl20.099 (2)0.111 (3)0.0747 (19)−0.0099 (19)0.0257 (17)−0.0069 (18)
N10.054 (4)0.055 (4)0.052 (4)−0.006 (3)0.020 (3)−0.003 (3)
N20.062 (5)0.055 (5)0.052 (5)−0.001 (3)0.022 (4)−0.002 (3)
C30.050 (5)0.067 (6)0.056 (5)−0.004 (4)0.021 (4)0.006 (5)
C40.067 (6)0.067 (6)0.061 (6)−0.004 (5)0.023 (5)0.013 (5)
C50.059 (5)0.059 (6)0.058 (6)−0.006 (4)0.016 (4)−0.003 (4)
C60.079 (7)0.083 (8)0.069 (7)0.001 (6)0.037 (6)0.004 (6)
C70.126 (11)0.046 (6)0.078 (8)−0.017 (6)0.044 (8)0.000 (5)
C80.068 (6)0.060 (6)0.058 (6)0.002 (5)0.027 (5)−0.009 (5)
C90.061 (5)0.048 (5)0.053 (5)−0.007 (4)0.014 (4)−0.002 (4)
N100.063 (5)0.042 (4)0.054 (5)−0.002 (3)0.014 (3)−0.005 (3)
N110.045 (4)0.048 (4)0.063 (5)−0.001 (3)0.022 (3)−0.002 (3)
N120.047 (4)0.056 (4)0.057 (5)−0.002 (3)0.019 (3)0.000 (4)
C130.055 (5)0.052 (5)0.083 (7)0.001 (4)0.035 (5)−0.004 (5)
C140.064 (6)0.074 (7)0.067 (6)0.002 (5)0.039 (5)0.008 (5)
C150.055 (5)0.061 (6)0.047 (5)0.006 (4)0.021 (4)0.007 (4)
C160.057 (6)0.073 (7)0.092 (8)0.006 (5)0.037 (6)0.005 (6)
C170.059 (6)0.089 (8)0.063 (6)0.008 (5)0.019 (5)0.016 (6)
C180.047 (5)0.056 (5)0.071 (7)0.003 (4)0.011 (5)0.000 (5)
C190.045 (5)0.081 (7)0.058 (6)−0.004 (5)0.005 (4)0.007 (5)
O10.095 (6)0.083 (6)0.104 (7)0.008 (5)0.037 (6)0.015 (5)
O20.085 (5)0.084 (5)0.069 (5)0.028 (4)0.042 (4)0.025 (4)
Pt1—N12.013 (7)N10—H10A0.8900
Pt1—N112.015 (7)N11—C151.332 (12)
Pt1—N102.037 (7)N11—N121.370 (10)
Pt1—Cl12.298 (3)N12—C131.366 (12)
N1—C51.334 (12)N12—C181.448 (13)
N1—N21.375 (11)C13—C141.354 (15)
N2—C31.325 (12)C13—C161.470 (14)
N2—C81.477 (13)C14—C151.373 (13)
C3—C41.364 (15)C14—H14A0.9300
C3—C61.497 (15)C15—C171.493 (14)
C4—C51.365 (14)C16—H16A0.9600
C4—H4A0.9300C16—H16B0.9600
C5—C71.497 (15)C16—H16C0.9600
C6—H6A0.9600C17—H17A0.9600
C6—H6B0.9600C17—H17B0.9600
C6—H6C0.9600C17—H17C0.9600
C7—H7A0.9600C18—C191.520 (16)
C7—H7B0.9600C18—H18A0.9700
C7—H7C0.9600C18—H18B0.9700
C8—C91.534 (13)C19—H19A0.9700
C8—H8A0.9700C19—H19B0.9700
C8—H8B0.9700O1—H110.85 (2)
C9—N101.483 (12)O1—H120.85 (2)
C9—H9A0.9700O2—H210.84 (2)
C9—H9B0.9700O2—H220.84 (2)
N10—C191.470 (12)
N1—Pt1—N11174.6 (3)C19—N10—Pt1114.5 (6)
N1—Pt1—N1091.5 (3)C9—N10—Pt1117.9 (6)
N11—Pt1—N1083.1 (3)C19—N10—H10A104.3
N1—Pt1—Cl192.9 (2)C9—N10—H10A104.3
N11—Pt1—Cl192.4 (2)Pt1—N10—H10A104.3
N10—Pt1—Cl1175.3 (2)C15—N11—N12107.0 (7)
C5—N1—N2105.9 (7)C15—N11—Pt1135.9 (6)
C5—N1—Pt1134.5 (7)N12—N11—Pt1116.0 (6)
N2—N1—Pt1119.6 (6)C13—N12—N11109.1 (8)
C3—N2—N1110.2 (7)C13—N12—C18131.4 (8)
C3—N2—C8129.1 (9)N11—N12—C18119.3 (7)
N1—N2—C8119.6 (8)C14—C13—N12106.8 (8)
N2—C3—C4107.0 (9)C14—C13—C16130.7 (10)
N2—C3—C6122.2 (9)N12—C13—C16122.5 (10)
C4—C3—C6130.6 (9)C13—C14—C15108.0 (9)
C3—C4—C5107.5 (9)C13—C14—H14A126.0
C3—C4—H4A126.3C15—C14—H14A126.0
C5—C4—H4A126.3N11—C15—C14109.1 (9)
N1—C5—C4109.3 (9)N11—C15—C17123.0 (8)
N1—C5—C7123.9 (9)C14—C15—C17127.8 (9)
C4—C5—C7126.6 (10)C13—C16—H16A109.5
C3—C6—H6A109.5C13—C16—H16B109.5
C3—C6—H6B109.5H16A—C16—H16B109.5
H6A—C6—H6B109.5C13—C16—H16C109.5
C3—C6—H6C109.5H16A—C16—H16C109.5
H6A—C6—H6C109.5H16B—C16—H16C109.5
H6B—C6—H6C109.5C15—C17—H17A109.5
C5—C7—H7A109.5C15—C17—H17B109.5
C5—C7—H7B109.5H17A—C17—H17B109.5
H7A—C7—H7B109.5C15—C17—H17C109.5
C5—C7—H7C109.5H17A—C17—H17C109.5
H7A—C7—H7C109.5H17B—C17—H17C109.5
H7B—C7—H7C109.5N12—C18—C19109.9 (8)
N2—C8—C9108.0 (8)N12—C18—H18A109.7
N2—C8—H8A110.1C19—C18—H18A109.7
C9—C8—H8A110.1N12—C18—H18B109.7
N2—C8—H8B110.1C19—C18—H18B109.7
C9—C8—H8B110.1H18A—C18—H18B108.2
H8A—C8—H8B108.4N10—C19—C18112.2 (8)
N10—C9—C8110.1 (8)N10—C19—H19A109.2
N10—C9—H9A109.6C18—C19—H19A109.2
C8—C9—H9A109.6N10—C19—H19B109.2
N10—C9—H9B109.6C18—C19—H19B109.2
C8—C9—H9B109.6H19A—C19—H19B107.9
H9A—C9—H9B108.2H11—O1—H12101 (10)
C19—N10—C9109.8 (7)H21—O2—H22106 (10)
C5—N1—N2—C3−1.0 (11)C15—N11—N12—C132.0 (10)
Pt1—N1—N2—C3−179.8 (6)Pt1—N11—N12—C13171.7 (6)
C5—N1—N2—C8−170.2 (9)C15—N11—N12—C18177.2 (8)
Pt1—N1—N2—C810.9 (11)Pt1—N11—N12—C18−13.1 (10)
N1—N2—C3—C42.2 (11)N11—N12—C13—C14−1.1 (11)
C8—N2—C3—C4170.1 (10)C18—N12—C13—C14−175.5 (10)
N1—N2—C3—C6−174.6 (9)N11—N12—C13—C16−179.3 (9)
C8—N2—C3—C6−6.7 (17)C18—N12—C13—C166.3 (16)
N2—C3—C4—C5−2.5 (12)N12—C13—C14—C15−0.3 (12)
C6—C3—C4—C5173.9 (11)C16—C13—C14—C15177.7 (11)
N2—N1—C5—C4−0.6 (11)N12—N11—C15—C14−2.2 (11)
Pt1—N1—C5—C4177.9 (7)Pt1—N11—C15—C14−168.8 (7)
N2—N1—C5—C7174.4 (11)N12—N11—C15—C17178.0 (9)
Pt1—N1—C5—C7−7.0 (16)Pt1—N11—C15—C1711.4 (16)
C3—C4—C5—N11.9 (12)C13—C14—C15—N111.6 (12)
C3—C4—C5—C7−172.9 (11)C13—C14—C15—C17−178.7 (11)
C3—N2—C8—C9−112.7 (11)C13—N12—C18—C19−115.1 (11)
N1—N2—C8—C954.3 (11)N11—N12—C18—C1971.0 (11)
N2—C8—C9—N10−79.8 (10)C9—N10—C19—C18−163.9 (8)
C8—C9—N10—C19169.6 (8)Pt1—N10—C19—C18−28.6 (11)
C8—C9—N10—Pt136.0 (10)N12—C18—C19—N10−43.4 (12)
D—H···AD—HH···AD···AD—H···A
N10—H10A···O20.892.082.960 (11)172
O1—H11···Cl2i0.85 (2)2.26 (3)3.105 (11)174
O1—H12···Cl20.85 (2)2.28 (5)3.123 (11)169
O2—H21···Cl2ii0.84 (2)2.24 (4)3.063 (10)166
O2—H22···O1i0.84 (2)2.01 (4)2.839 (13)169
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
N10H10AO20.892.082.960(11)172
O1H11Cl2i 0.85(2)2.26(3)3.105(11)174
O1H12Cl20.85(2)2.28(5)3.123(11)169
O2H21Cl2ii 0.84(2)2.24(4)3.063(10)166
O2H22O1i 0.84(2)2.01(4)2.839(13)169

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  {Bis[2-(3,5-dimethyl-pyrazol-1-yl-κN)eth-yl]amine-κN}chloridopalladium(II) chloride 0.25-hydrate.

Authors:  Ilia A Guzei; Lara C Spencer; Nangamso Miti; James Darkwa
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-11

3.  Metal ions directing the geometry and nuclearity of azido-metal(II) complexes derived from bis(2-(3,5-dimethyl-1H-pyrazol-1-yl)ethyl)amine.

Authors:  Salah S Massoud; Febee R Louka; Yasser K Obaid; Ramon Vicente; Joan Ribas; Roland C Fischer; Franz A Mautner
Journal:  Dalton Trans       Date:  2013-01-21       Impact factor: 4.390

4.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

  4 in total

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