Literature DB >> 26029316

Bayesian Polynomial Regression Models to Fit Multiple Genetic Models for Quantitative Traits.

Harold Bae1, Thomas Perls2, Martin Steinberg3, Paola Sebastiani1.   

Abstract

We present a coherent Bayesian framework for selection of the most likely model from the five genetic models (genotypic, additive, dominant, co-dominant, and recessive) commonly used in genetic association studies. The approach uses a polynomial parameterization of genetic data to simultaneously fit the five models and save computations. We provide a closed-form expression of the marginal likelihood for normally distributed data, and evaluate the performance of the proposed method and existing method through simulated and real genome-wide data sets.

Entities:  

Keywords:  Bayesian model selection; GWAS; additive; co-dominant; dominant; marginal likelihood; parameterization; recessive

Year:  2015        PMID: 26029316      PMCID: PMC4446790          DOI: 10.1214/14-BA880

Source DB:  PubMed          Journal:  Bayesian Anal        ISSN: 1931-6690            Impact factor:   3.728


  34 in total

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2.  Genetic model testing and statistical power in population-based association studies of quantitative traits.

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8.  Multilocus Bayesian meta-analysis of gene-disease associations.

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9.  Genome-wide association study of personality traits in the long life family study.

Authors:  Harold T Bae; Paola Sebastiani; Jenny X Sun; Stacy L Andersen; E Warwick Daw; Antonio Terracciano; Luigi Ferrucci; Thomas T Perls
Journal:  Front Genet       Date:  2013-05-08       Impact factor: 4.599

10.  The genetics of extreme longevity: lessons from the new England centenarian study.

Authors:  Paola Sebastiani; Thomas T Perls
Journal:  Front Genet       Date:  2012-11-30       Impact factor: 4.599

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  3 in total

1.  Evaluation of an ensemble of genetic models for prediction of a quantitative trait.

Authors:  Jacqueline N Milton; Martin H Steinberg; Paola Sebastiani
Journal:  Front Genet       Date:  2015-01-13       Impact factor: 4.599

2.  A genome-wide association study reveals a locus for bilateral iridal hypopigmentation in Holstein Friesian cattle.

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3.  Paraoxonase 1 concerning dyslipidaemia, cardiovascular diseases, and mortality in haemodialysis patients.

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  3 in total

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