Literature DB >> 26028803

Shape index distribution based local surface complexity applied to the human cortex.

Sun Hyung Kim1, Vladimir Fonov2, D Louis Collins2, Guido Gerig3, Martin A Styner4.   

Abstract

The quantification of local surface complexity in the human cortex has shown to be of interest in investigating population differences as well as developmental changes in neurodegenerative or neurodevelopment diseases. We propose a novel assessment method that represents local complexity as the difference between the observed distributions of local surface topology to its best-fit basic topology model within a given local neighborhood. This distribution difference is estimated via Earth Move Distance (EMD) over the histogram within the local neighborhood of the surface topology quantified via the Shape Index (SI) measure. The EMD scores have a range from simple complexity (0.0), which indicates a consistent local surface topology, up to high complexity (1.0), which indicates a highly variable local surface topology. The basic topology models are categorized as 9 geometric situation modeling situations such as crowns, ridges and fundi of cortical gyro and sulci. We apply a geodesic kernel to calculate the local SI histrogram distribution within a given region. In our experiments, we obtained the results of local complexity that shows generally higher complexity in the gyral/sulcal wall regions and lower complexity in some gyral ridges and lowest complexity in sulcal fundus areas. In addition, we show expected, preliminary results of increased surface complexity across most of the cortical surface within the first years of postnatal life, hypothesized to be due to the changes such as development of sulcal pits.

Entities:  

Keywords:  Earth Move Distance; Local Shape Complexity Index; Shape Index

Year:  2015        PMID: 26028803      PMCID: PMC4449152          DOI: 10.1117/12.2081560

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  14 in total

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Journal:  Neuroimage       Date:  2005-08-01       Impact factor: 6.556

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Journal:  Cereb Cortex       Date:  1996 Nov-Dec       Impact factor: 5.357

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Authors:  Jan H Lui; David V Hansen; Arnold R Kriegstein
Journal:  Cell       Date:  2011-07-08       Impact factor: 41.582

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Authors:  Ph G Batchelor; A D Castellano Smith; D L G Hill; D J Hawkes; T C S Cox; A F Dean
Journal:  IEEE Trans Med Imaging       Date:  2002-08       Impact factor: 10.048

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Authors:  D L Collins; P Neelin; T M Peters; A C Evans
Journal:  J Comput Assist Tomogr       Date:  1994 Mar-Apr       Impact factor: 1.826

9.  A surface-based approach to quantify local cortical gyrification.

Authors:  Marie Schaer; Meritxell Bach Cuadra; Lucas Tamarit; François Lazeyras; Stephan Eliez; Jean-Philippe Thiran
Journal:  IEEE Trans Med Imaging       Date:  2008-02       Impact factor: 10.048

10.  Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain.

Authors:  B B Avants; C L Epstein; M Grossman; J C Gee
Journal:  Med Image Anal       Date:  2007-06-23       Impact factor: 8.545

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  1 in total

1.  Development of cortical shape in the human brain from 6 to 24months of age via a novel measure of shape complexity.

Authors:  Sun Hyung Kim; Ilwoo Lyu; Vladimir S Fonov; Clement Vachet; Heather C Hazlett; Rachel G Smith; Joseph Piven; Stephen R Dager; Robert C Mckinstry; John R Pruett; Alan C Evans; D Louis Collins; Kelly N Botteron; Robert T Schultz; Guido Gerig; Martin A Styner
Journal:  Neuroimage       Date:  2016-05-03       Impact factor: 6.556

  1 in total

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