Literature DB >> 26025048

In silico functional annotation of a hypothetical protein from Staphylococcus aureus.

P Bharat Siva Varma1, Yesu B Adimulam2, Subrahmaniam Kodukula3.   

Abstract

Unknown proteins or hypothetical proteins exist but have not been characterized or linked to known genes. Domains of unknown function are experimentally identified proteins with no known functional or structural domain. In this paper, the investigation and characterization of the likely functional aspects of a hypothetical protein, YP_001317347.1, from Staphylococcus aureus was performed using various computational methods and tools. Based on the analysis, the protein has a YbbR domain and is expected to bind ribosomal subunits. The analysis reported here helps in understanding the importance of YbbR domains and will aid in the development of novel antibacterial agents.
Copyright © 2015 King Saud Bin Abdulaziz University for Health Sciences. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Blast; Domains of unknown function; HHpred; Hypothetical protein

Mesh:

Substances:

Year:  2015        PMID: 26025048     DOI: 10.1016/j.jiph.2015.03.007

Source DB:  PubMed          Journal:  J Infect Public Health        ISSN: 1876-0341            Impact factor:   3.718


  13 in total

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3.  Improved Annotations of 23 Differentially Expressed Hypothetical Proteins in Methicillin Resistant S.aureus.

Authors:  Jessica Marklevitz; Laura K Harris
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Journal:  Biotechnol Lett       Date:  2022-01-17       Impact factor: 2.716

9.  Screening and characterization of hypothetical proteins of Plasmodium falciparum as novel vaccine candidates in the fight against malaria using reverse vaccinology.

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Journal:  J Genet Eng Biotechnol       Date:  2021-07-16

10.  Gene Expression Meta-Analysis Reveals Interferon-Induced Genes Associated With SARS Infection in Lungs.

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Journal:  Front Immunol       Date:  2021-07-23       Impact factor: 7.561

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