Literature DB >> 26022228

Natural Language Processing for Real-Time Catheter-Associated Urinary Tract Infection Surveillance: Results of a Pilot Implementation Trial.

Westyn Branch-Elliman1, Judith Strymish2, Valmeek Kudesia2, Amy K Rosen3, Kalpana Gupta2.   

Abstract

BACKGROUND: Incidence of catheter-associated urinary tract infection (CAUTI) is a quality benchmark. To streamline conventional detection methods, an electronic surveillance system augmented with natural language processing (NLP), which gathers data recorded in clinical notes without manual review, was implemented for real-time surveillance.
OBJECTIVE: To assess the utility of this algorithm for identifying indwelling urinary catheter days and CAUTI.
SETTING: Large, urban tertiary care Veterans Affairs hospital.
METHODS: All patients admitted to the acute care units and the intensive care unit from March 1, 2013, through November 30, 2013, were included. Standard surveillance, which includes electronic and manual data extraction, was compared with the NLP-augmented algorithm.
RESULTS: The NLP-augmented algorithm identified 27% more indwelling urinary catheter days in the acute care units and 28% fewer indwelling urinary catheter days in the intensive care unit. The algorithm flagged 24 CAUTI versus 20 CAUTI by standard surveillance methods; the CAUTI identified were overlapping but not the same. The overall positive predictive value was 54.2%, and overall sensitivity was 65% (90.9% in the acute care units but 33% in the intensive care unit). Dissimilarities in the operating characteristics of the algorithm between types of unit were due to differences in documentation practice. Development and implementation of the algorithm required substantial upfront effort of clinicians and programmers to determine current language patterns.
CONCLUSIONS: The NLP algorithm was most useful for identifying simple clinical variables. Algorithm operating characteristics were specific to local documentation practices. The algorithm did not perform as well as standard surveillance methods.

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Year:  2015        PMID: 26022228     DOI: 10.1017/ice.2015.122

Source DB:  PubMed          Journal:  Infect Control Hosp Epidemiol        ISSN: 0899-823X            Impact factor:   3.254


  10 in total

1.  Electronic Surveillance For Catheter-Associated Urinary Tract Infection Using Natural Language Processing.

Authors:  Patrick C Sanger; Marion Granich; Robin Olsen-Scribner; Rupali Jain; William B Lober; Ann Stapleton; Paul S Pottinger
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16

2.  The Reliability of Electronic Health Record Data Used for Obstetrical Research.

Authors:  Molly R Altman; Karen Colorafi; Kenn B Daratha
Journal:  Appl Clin Inform       Date:  2018-03-07       Impact factor: 2.342

3.  Identification of postoperative complications using electronic health record data and machine learning.

Authors:  Michael Bronsert; Abhinav B Singh; William G Henderson; Karl Hammermeister; Robert A Meguid; Kathryn L Colborn
Journal:  Am J Surg       Date:  2019-10-09       Impact factor: 2.565

4.  Identification of urinary tract infections using electronic health record data.

Authors:  Kathryn L Colborn; Michael Bronsert; Karl Hammermeister; William G Henderson; Abhinav B Singh; Robert A Meguid
Journal:  Am J Infect Control       Date:  2018-12-04       Impact factor: 2.918

5.  Natural Language Processing Applications in the Clinical Neurosciences: A Machine Learning Augmented Systematic Review.

Authors:  Quinlan D Buchlak; Nazanin Esmaili; Christine Bennett; Farrokh Farrokhi
Journal:  Acta Neurochir Suppl       Date:  2022

6.  Capturing Surgical Data: Comparing a Quality Improvement Registry to Natural Language Processing and Manual Chart Review.

Authors:  Benjamin T Miller; Aldo Fafaj; Luciano Tastaldi; Hemasat Alkhatib; Samuel Zolin; Raha AlMarzooqi; Chao Tu; Diya Alaedeen; Ajita S Prabhu; David M Krpata; Michael J Rosen; Clayton C Petro
Journal:  J Gastrointest Surg       Date:  2022-02-28       Impact factor: 3.267

7.  Accurate Identification of Fatty Liver Disease in Data Warehouse Utilizing Natural Language Processing.

Authors:  Joseph S Redman; Yamini Natarajan; Jason K Hou; Jingqi Wang; Muzammil Hanif; Hua Feng; Jennifer R Kramer; Roxanne Desiderio; Hua Xu; Hashem B El-Serag; Fasiha Kanwal
Journal:  Dig Dis Sci       Date:  2017-08-31       Impact factor: 3.199

8.  The Revival of the Notes Field: Leveraging the Unstructured Content in Electronic Health Records.

Authors:  Michela Assale; Linda Greta Dui; Andrea Cina; Andrea Seveso; Federico Cabitza
Journal:  Front Med (Lausanne)       Date:  2019-04-17

9.  Novel methodology to measure pre-procedure antimicrobial prophylaxis: integrating text searches with structured data from the Veterans Health Administration's electronic medical record.

Authors:  Hillary J Mull; Kelly Stolzmann; Emily Kalver; Marlena H Shin; Marin L Schweizer; Archana Asundi; Payal Mehta; Maggie Stanislawski; Westyn Branch-Elliman
Journal:  BMC Med Inform Decis Mak       Date:  2020-01-30       Impact factor: 2.796

10.  Electronically assisted surveillance systems of healthcare-associated infections: a systematic review.

Authors:  H Roel A Streefkerk; Roel Paj Verkooijen; Wichor M Bramer; Henri A Verbrugh
Journal:  Euro Surveill       Date:  2020-01
  10 in total

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