Literature DB >> 26020502

Visualizing epigenomic data.

Vivien Marx1.   

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Year:  2015        PMID: 26020502     DOI: 10.1038/nmeth.3409

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


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  6 in total

1.  ChromHMM: automating chromatin-state discovery and characterization.

Authors:  Jason Ernst; Manolis Kellis
Journal:  Nat Methods       Date:  2012-02-28       Impact factor: 28.547

2.  Large-scale imputation of epigenomic datasets for systematic annotation of diverse human tissues.

Authors:  Jason Ernst; Manolis Kellis
Journal:  Nat Biotechnol       Date:  2015-02-18       Impact factor: 54.908

3.  Comprehensive analysis of DNA methylation data with RnBeads.

Authors:  Yassen Assenov; Fabian Müller; Pavlo Lutsik; Jörn Walter; Thomas Lengauer; Christoph Bock
Journal:  Nat Methods       Date:  2014-09-28       Impact factor: 28.547

4.  Comprehensive analysis of the chromatin landscape in Drosophila melanogaster.

Authors:  Peter V Kharchenko; Artyom A Alekseyenko; Yuri B Schwartz; Aki Minoda; Nicole C Riddle; Jason Ernst; Peter J Sabo; Erica Larschan; Andrey A Gorchakov; Tingting Gu; Daniela Linder-Basso; Annette Plachetka; Gregory Shanower; Michael Y Tolstorukov; Lovelace J Luquette; Ruibin Xi; Youngsook L Jung; Richard W Park; Eric P Bishop; Theresa K Canfield; Richard Sandstrom; Robert E Thurman; David M MacAlpine; John A Stamatoyannopoulos; Manolis Kellis; Sarah C R Elgin; Mitzi I Kuroda; Vincenzo Pirrotta; Gary H Karpen; Peter J Park
Journal:  Nature       Date:  2010-12-22       Impact factor: 49.962

5.  EpiExplorer: live exploration and global analysis of large epigenomic datasets.

Authors:  Konstantin Halachev; Hannah Bast; Felipe Albrecht; Thomas Lengauer; Christoph Bock
Journal:  Genome Biol       Date:  2012-10-03       Impact factor: 13.583

6.  Epiviz: interactive visual analytics for functional genomics data.

Authors:  Florin Chelaru; Llewellyn Smith; Naomi Goldstein; Héctor Corrada Bravo
Journal:  Nat Methods       Date:  2014-08-03       Impact factor: 28.547

  6 in total

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