Literature DB >> 26019013

Multiscale mechanobiology: computational models for integrating molecules to multicellular systems.

Michael Mak1, Taeyoon Kim, Muhammad H Zaman, Roger D Kamm.   

Abstract

Mechanical signals exist throughout the biological landscape. Across all scales, these signals, in the form of force, stiffness, and deformations, are generated and processed, resulting in an active mechanobiological circuit that controls many fundamental aspects of life, from protein unfolding and cytoskeletal remodeling to collective cell motions. The multiple scales and complex feedback involved present a challenge for fully understanding the nature of this circuit, particularly in development and disease in which it has been implicated. Computational models that accurately predict and are based on experimental data enable a means to integrate basic principles and explore fine details of mechanosensing and mechanotransduction in and across all levels of biological systems. Here we review recent advances in these models along with supporting and emerging experimental findings.

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Year:  2015        PMID: 26019013      PMCID: PMC4677065          DOI: 10.1039/c5ib00043b

Source DB:  PubMed          Journal:  Integr Biol (Camb)        ISSN: 1757-9694            Impact factor:   2.192


  125 in total

Review 1.  Extracellular matrix determinants of proteolytic and non-proteolytic cell migration.

Authors:  Katarina Wolf; Peter Friedl
Journal:  Trends Cell Biol       Date:  2011-10-27       Impact factor: 20.808

2.  Development of a three-dimensional multiscale agent-based tumor model: simulating gene-protein interaction profiles, cell phenotypes and multicellular patterns in brain cancer.

Authors:  Le Zhang; Chaitanya A Athale; Thomas S Deisboeck
Journal:  J Theor Biol       Date:  2006-07-27       Impact factor: 2.691

Review 3.  Tissue cells feel and respond to the stiffness of their substrate.

Authors:  Dennis E Discher; Paul Janmey; Yu-Li Wang
Journal:  Science       Date:  2005-11-18       Impact factor: 47.728

4.  Rapid disorganization of mechanically interacting systems of mammary acini.

Authors:  Quanming Shi; Rajarshi P Ghosh; Hanna Engelke; Chris H Rycroft; Luke Cassereau; James A Sethian; Valerie M Weaver; Jan T Liphardt
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-30       Impact factor: 11.205

5.  Long-range force transmission in fibrous matrices enabled by tension-driven alignment of fibers.

Authors:  Hailong Wang; A S Abhilash; Christopher S Chen; Rebecca G Wells; Vivek B Shenoy
Journal:  Biophys J       Date:  2014-12-02       Impact factor: 4.033

6.  Integrating focal adhesion dynamics, cytoskeleton remodeling, and actin motor activity for predicting cell migration on 3D curved surfaces of the extracellular matrix.

Authors:  Min-Cheol Kim; Choong Kim; Levi Wood; Devin Neal; Roger D Kamm; H Harry Asada
Journal:  Integr Biol (Camb)       Date:  2012-11       Impact factor: 2.192

7.  A computational model of the response of adherent cells to stretch and changes in substrate stiffness.

Authors:  Harikrishnan Parameswaran; Kenneth R Lutchen; Béla Suki
Journal:  J Appl Physiol (1985)       Date:  2014-01-09

8.  A microfluidic system with optical laser tweezers to study mechanotransduction and focal adhesion recruitment.

Authors:  Peyman Honarmandi; Hyungsuk Lee; Matthew J Lang; Roger D Kamm
Journal:  Lab Chip       Date:  2010-12-08       Impact factor: 6.799

9.  Stretching single talin rod molecules activates vinculin binding.

Authors:  Armando del Rio; Raul Perez-Jimenez; Ruchuan Liu; Pere Roca-Cusachs; Julio M Fernandez; Michael P Sheetz
Journal:  Science       Date:  2009-01-30       Impact factor: 63.714

10.  Fluidization and resolidification of the human bladder smooth muscle cell in response to transient stretch.

Authors:  Cheng Chen; Ramaswamy Krishnan; Enhua Zhou; Aruna Ramachandran; Dhananjay Tambe; Kavitha Rajendran; Rosalyn M Adam; Linhong Deng; Jeffrey J Fredberg
Journal:  PLoS One       Date:  2010-08-06       Impact factor: 3.240

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  20 in total

Review 1.  Single-Cell Migration in Complex Microenvironments: Mechanics and Signaling Dynamics.

Authors:  Michael Mak; Fabian Spill; Roger D Kamm; Muhammad H Zaman
Journal:  J Biomech Eng       Date:  2016-02       Impact factor: 2.097

2.  A Biophysical Model for Curvature-Guided Cell Migration.

Authors:  Maxime Vassaux; Laurent Pieuchot; Karine Anselme; Maxence Bigerelle; Jean-Louis Milan
Journal:  Biophys J       Date:  2019-07-22       Impact factor: 4.033

Review 3.  Multiscale force sensing in development.

Authors:  Nicoletta I Petridou; Zoltán Spiró; Carl-Philipp Heisenberg
Journal:  Nat Cell Biol       Date:  2017-05-31       Impact factor: 28.824

Review 4.  Towards personalized computational oncology: from spatial models of tumour spheroids, to organoids, to tissues.

Authors:  Aleksandra Karolak; Dmitry A Markov; Lisa J McCawley; Katarzyna A Rejniak
Journal:  J R Soc Interface       Date:  2018-01       Impact factor: 4.118

Review 5.  Molecular simulations of cellular processes.

Authors:  Fabio Trovato; Giordano Fumagalli
Journal:  Biophys Rev       Date:  2017-11-28

Review 6.  Cellular adaptation to biomechanical stress across length scales in tissue homeostasis and disease.

Authors:  Penney M Gilbert; Valerie M Weaver
Journal:  Semin Cell Dev Biol       Date:  2016-09-15       Impact factor: 7.727

Review 7.  Stretch your heart-but not too far: The role of titin mutations in dilated cardiomyopathy.

Authors:  Eric J Stöhr; Hiroo Takayama; Giovanni Ferrari
Journal:  J Thorac Cardiovasc Surg       Date:  2018-03-12       Impact factor: 5.209

Review 8.  The Nuclear Option: Evidence Implicating the Cell Nucleus in Mechanotransduction.

Authors:  Spencer E Szczesny; Robert L Mauck
Journal:  J Biomech Eng       Date:  2017-02-01       Impact factor: 2.097

9.  A mesoscale mechanical model of cellular interactions.

Authors:  Kathleen T DiNapoli; Douglas N Robinson; Pablo A Iglesias
Journal:  Biophys J       Date:  2021-10-21       Impact factor: 4.033

10.  A constriction channel analysis of astrocytoma stiffness and disease progression.

Authors:  P M Graybill; R K Bollineni; Z Sheng; R V Davalos; R Mirzaeifar
Journal:  Biomicrofluidics       Date:  2021-03-16       Impact factor: 2.800

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