Literature DB >> 26017044

Complete mitochondrial genome organization of Tor tor (Hamilton, 1822).

Rohit Kumar1, Chirag Goel1, Prabhati Kumari Sahoo1, Atul K Singh1, Ashoktaru Barat1.   

Abstract

The complete mitochondrial genome of Tor tor, a threatened "Mahseer" was sequenced for the first time. The mitochondrial genome size determined to be 16,554 bp in length and consisted of 13 protein-coding genes (PCGs), 22 tRNAs, 2 rRNA genes and a control region or displacement loop (D-Loop) region, resembling the typical organizational pattern of most of the teleost. The overall base composition found was A: 31.8%, T: 25%, G: 15.7% and C: 27.4%; A + T: 56.9% and G + C: 43.1%. The phylogenetic tree constructed using 11 other cyprinids' total mtDNA datasets confirmed the location of present species among mahseers. The total sequence data could support further study in molecular systematics, species identification, evolutionary and conservation genetics.

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Keywords:  Genetic characterization; Tor mahseer; phylogeny

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Year:  2015        PMID: 26017044     DOI: 10.3109/19401736.2015.1038795

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  1 in total

1.  Complete mitochondrial genome of threatened mahseer Tor tor (Hamilton 1822) and its phylogenetic relationship within Cyprinidae family.

Authors:  A Pavan-Kumar; Sudhanshu Raman; Prakash G Koringa; Namrata Patel; Tejas Shah; Rajeev K Singh; Gopal Krishna; C G Joshi; P Gireesh-Babu; Aparna Chaudhari
Journal:  J Genet       Date:  2016-12       Impact factor: 1.166

  1 in total

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