Literature DB >> 26016526

Malaria genotyping for epidemiologic surveillance.

Bryan Greenhouse1, David L Smith2.   

Abstract

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Year:  2015        PMID: 26016526      PMCID: PMC4460462          DOI: 10.1073/pnas.1507727112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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  15 in total

1.  Modeling malaria genomics reveals transmission decline and rebound in Senegal.

Authors:  Rachel F Daniels; Stephen F Schaffner; Edward A Wenger; Joshua L Proctor; Hsiao-Han Chang; Wesley Wong; Nicholas Baro; Daouda Ndiaye; Fatou Ba Fall; Medoune Ndiop; Mady Ba; Danny A Milner; Terrie E Taylor; Daniel E Neafsey; Sarah K Volkman; Philip A Eckhoff; Daniel L Hartl; Dyann F Wirth
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-04       Impact factor: 11.205

2.  Estimating medium- and long-term trends in malaria transmission by using serological markers of malaria exposure.

Authors:  C J Drakeley; P H Corran; P G Coleman; J E Tongren; S L R McDonald; I Carneiro; R Malima; J Lusingu; A Manjurano; W M M Nkya; M M Lemnge; J Cox; H Reyburn; E M Riley
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-25       Impact factor: 11.205

3.  Microsatellite markers reveal a spectrum of population structures in the malaria parasite Plasmodium falciparum.

Authors:  T J Anderson; B Haubold; J T Williams; J G Estrada-Franco; L Richardson; R Mollinedo; M Bockarie; J Mokili; S Mharakurwa; N French; J Whitworth; I D Velez; A H Brockman; F Nosten; M U Ferreira; K P Day
Journal:  Mol Biol Evol       Date:  2000-10       Impact factor: 16.240

4.  Phylogeography of var gene repertoires reveals fine-scale geospatial clustering of Plasmodium falciparum populations in a highly endemic area.

Authors:  Sofonias K Tessema; Stephanie L Monk; Mark B Schultz; Livingstone Tavul; John C Reeder; Peter M Siba; Ivo Mueller; Alyssa E Barry
Journal:  Mol Ecol       Date:  2015-01-09       Impact factor: 6.185

5.  Genetic diversity and chloroquine selective sweeps in Plasmodium falciparum.

Authors:  John C Wootton; Xiaorong Feng; Michael T Ferdig; Roland A Cooper; Jianbing Mu; Dror I Baruch; Alan J Magill; Xin-Zhuan Su
Journal:  Nature       Date:  2002-07-18       Impact factor: 49.962

6.  Plasmodium falciparum var gene expression is modified by host immunity.

Authors:  George M Warimwe; Thomas M Keane; Gregory Fegan; Jennifer N Musyoki; Charles R J C Newton; Arnab Pain; Matthew Berriman; Kevin Marsh; Peter C Bull
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-11       Impact factor: 11.205

7.  Genetic Evidence of Importation of Drug-Resistant Plasmodium falciparum to Guatemala from the Democratic Republic of the Congo.

Authors:  Jaymin C Patel; Steve M Taylor; Patricia C Juliao; Christian M Parobek; Mark Janko; Luis Demetrio Gonzalez; Lucia Ortiz; Norma Padilla; Antoinette K Tshefu; Michael Emch; Venkatachalam Udhayakumar; Kim Lindblade; Steven R Meshnick
Journal:  Emerg Infect Dis       Date:  2014-06       Impact factor: 6.883

8.  Mosquito biology. Evolution of sexual traits influencing vectorial capacity in anopheline mosquitoes.

Authors:  Sara N Mitchell; Evdoxia G Kakani; Adam South; Paul I Howell; Robert M Waterhouse; Flaminia Catteruccia
Journal:  Science       Date:  2015-02-27       Impact factor: 47.728

9.  Genetic structure of Plasmodium falciparum and elimination of malaria, Comoros archipelago.

Authors:  Stanislas Rebaudet; Hervé Bogreau; Rahamatou Silaï; Jean François Lepere; Lionel Bertaux; Bruno Pradines; Jean Delmont; Philippe Gautret; Philippe Parola; Christophe Rogier
Journal:  Emerg Infect Dis       Date:  2010-11       Impact factor: 6.883

10.  Multiple origins and regional dispersal of resistant dhps in African Plasmodium falciparum malaria.

Authors:  Richard J Pearce; Hirva Pota; Marie-Solange B Evehe; El-Hadj Bâ; Ghyslain Mombo-Ngoma; Allen L Malisa; Rosalynn Ord; Walter Inojosa; Alexandre Matondo; Diadier A Diallo; Wilfred Mbacham; Ingrid V van den Broek; Todd D Swarthout; Asefaw Getachew; Seyoum Dejene; Martin P Grobusch; Fanta Njie; Samuel Dunyo; Margaret Kweku; Seth Owusu-Agyei; Daniel Chandramohan; Maryline Bonnet; Jean-Paul Guthmann; Sian Clarke; Karen I Barnes; Elizabeth Streat; Stark T Katokele; Petrina Uusiku; Chris O Agboghoroma; Olufunmilayo Y Elegba; Badara Cissé; Ishraga E A-Elbasit; Hayder A Giha; S Patrick Kachur; Caroline Lynch; John B Rwakimari; Pascalina Chanda; Moonga Hawela; Brian Sharp; Inbarani Naidoo; Cally Roper
Journal:  PLoS Med       Date:  2009-04-14       Impact factor: 11.069

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  12 in total

1.  Mapping residual transmission for malaria elimination.

Authors:  Robert C Reiner; Arnaud Le Menach; Simon Kunene; Nyasatu Ntshalintshali; Michelle S Hsiang; T Alex Perkins; Bryan Greenhouse; Andrew J Tatem; Justin M Cohen; David L Smith
Journal:  Elife       Date:  2015-12-29       Impact factor: 8.140

2.  The changing malaria landscape in Aseer region, Kingdom of Saudi Arabia: 2000-2015.

Authors:  Ali Mohamed Alshahrani; Tarig M Abdelgader; Ibrahim Saeed; AbdulRhman Al-Akhshami; Mohamed Al-Ghamdi; Mohammed H Al-Zahrani; Ibrahim El Hassan; David Kyalo; Robert W Snow
Journal:  Malar J       Date:  2016-11-08       Impact factor: 2.979

3.  THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites.

Authors:  Hsiao-Han Chang; Colin J Worby; Adoke Yeka; Joaniter Nankabirwa; Moses R Kamya; Sarah G Staedke; Grant Dorsey; Maxwell Murphy; Daniel E Neafsey; Anna E Jeffreys; Christina Hubbart; Kirk A Rockett; Roberto Amato; Dominic P Kwiatkowski; Caroline O Buckee; Bryan Greenhouse
Journal:  PLoS Comput Biol       Date:  2017-01-26       Impact factor: 4.475

4.  Adapting the local response for malaria elimination through evaluation of the 1-3-7 system performance in the China-Myanmar border region.

Authors:  Duoquan Wang; Chris Cotter; Xiaodong Sun; Adam Bennett; Roly D Gosling; Ning Xiao
Journal:  Malar J       Date:  2017-01-31       Impact factor: 2.979

Review 5.  Use cases for genetic epidemiology in malaria elimination.

Authors:  Ronit Dalmat; Brienna Naughton; Tao Sheng Kwan-Gett; Jennifer Slyker; Erin M Stuckey
Journal:  Malar J       Date:  2019-05-07       Impact factor: 2.979

Review 6.  Applying next-generation sequencing to track falciparum malaria in sub-Saharan Africa.

Authors:  Sofonias K Tessema; Jaishree Raman; Craig W Duffy; Deus S Ishengoma; Alfred Amambua-Ngwa; Bryan Greenhouse
Journal:  Malar J       Date:  2019-09-03       Impact factor: 2.979

7.  Quantifying connectivity between local Plasmodium falciparum malaria parasite populations using identity by descent.

Authors:  Aimee R Taylor; Stephen F Schaffner; Gustavo C Cerqueira; Standwell C Nkhoma; Timothy J C Anderson; Kanlaya Sriprawat; Aung Pyae Phyo; François Nosten; Daniel E Neafsey; Caroline O Buckee
Journal:  PLoS Genet       Date:  2017-10-27       Impact factor: 5.917

8.  Genetic evidence for imported malaria and local transmission in Richard Toll, Senegal.

Authors:  Rachel F Daniels; Stephen F Schaffner; Yakou Dieye; Gnagna Dieng; Michael Hainsworth; Fatou B Fall; Coumba Ndoffene Diouf; Medoune Ndiop; Moustapha Cisse; Alioune Badara Gueye; Oumar Sarr; Philippe Guinot; Awa B Deme; Amy K Bei; Mouhamad Sy; Julie Thwing; Bronwyn MacInnis; Duncan Earle; Caterina Guinovart; Doudou Sene; Daniel L Hartl; Daouda Ndiaye; Richard W Steketee; Dyann F Wirth; Sarah K Volkman
Journal:  Malar J       Date:  2020-08-03       Impact factor: 2.979

9.  Seasonal variations in Plasmodium falciparum parasite prevalence assessed by varying diagnostic tests in asymptomatic children in southern Ghana.

Authors:  Ruth Ayanful-Torgby; Neils B Quashie; Johnson N Boampong; Kim C Williamson; Linda E Amoah
Journal:  PLoS One       Date:  2018-06-15       Impact factor: 3.240

10.  Evaluating the Performance of Malaria Genetics for Inferring Changes in Transmission Intensity Using Transmission Modeling.

Authors:  Oliver J Watson; Lucy C Okell; Joel Hellewell; Hannah C Slater; H Juliette T Unwin; Irene Omedo; Philip Bejon; Robert W Snow; Abdisalan M Noor; Kirk Rockett; Christina Hubbart; Joaniter I Nankabirwa; Bryan Greenhouse; Hsiao-Han Chang; Azra C Ghani; Robert Verity
Journal:  Mol Biol Evol       Date:  2021-01-04       Impact factor: 16.240

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