Literature DB >> 26012777

Remembrance of time series past: simple chromatic method for visualizing trends in biomedical signals.

Anton Burykin1, Sara Mariani, Teresa Henriques, Tiago F Silva, William T Schnettler, Madalena D Costa, Ary L Goldberger.   

Abstract

Analysis of biomedical time series plays an essential role in clinical management and basic investigation. However, conventional monitors streaming data in real-time show only the most recent values, not referenced to past dynamics. We describe a chromatic approach to bring the 'memory' of the physiologic system's past behavior into the current display window.The method employs the estimated probability density function of a time series segment to colorize subsequent data points.For illustrative purposes, we selected open-access recordings of continuous: (1) fetal heart rate during the pre-partum period, and (2) heart rate and systemic blood pressure from a critical care patient during a spontaneous breathing trial. The colorized outputs highlight changes from the 'baseline' reference state, the latter defined as the mode value assumed by the signal, i.e. the maximum of its probability density function.A colorization method may facilitate the recognition of relevant features of time series, especially shifts in baseline dynamics and other trends (including transient and longer-term deviation from baseline values) which may not be as readily noticed using traditional displays. This method may be applicable in clinical monitoring (real-time or off-line) and in research settings. Prospective studies are needed to assess the utility of this approach.

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Year:  2015        PMID: 26012777      PMCID: PMC4492109          DOI: 10.1088/0967-3334/36/7/N95

Source DB:  PubMed          Journal:  Physiol Meas        ISSN: 0967-3334            Impact factor:   2.833


  9 in total

1.  PhysioBank, PhysioToolkit, and PhysioNet: components of a new research resource for complex physiologic signals.

Authors:  A L Goldberger; L A Amaral; L Glass; J M Hausdorff; P C Ivanov; R G Mark; J E Mietus; G B Moody; C K Peng; H E Stanley
Journal:  Circulation       Date:  2000-06-13       Impact factor: 29.690

2.  Enhancing scatterplots with smoothed densities.

Authors:  Paul H C Eilers; Jelle J Goeman
Journal:  Bioinformatics       Date:  2004-01-22       Impact factor: 6.937

3.  Using "off-the-shelf" tools for terabyte-scale waveform recording in intensive care: computer system design, database description and lessons learned.

Authors:  Anton Burykin; Tyler Peck; Timothy G Buchman
Journal:  Comput Methods Programs Biomed       Date:  2010-11-18       Impact factor: 5.428

4.  Omniview-SisPorto 3.5 - a central fetal monitoring station with online alerts based on computerized cardiotocogram+ST event analysis.

Authors:  Diogo Ayres-de-Campos; Paulo Sousa; Antonia Costa; Joao Bernardes
Journal:  J Perinat Med       Date:  2008       Impact factor: 1.901

5.  Baseline in human fetal heart-rate records.

Authors:  G S Dawes; C R Houghton; C W Redman
Journal:  Br J Obstet Gynaecol       Date:  1982-04

6.  Nonparametric entropy estimation using kernel densities.

Authors:  Douglas E Lake
Journal:  Methods Enzymol       Date:  2009       Impact factor: 1.600

7.  "Glucose-at-a-Glance": New Method to Visualize the Dynamics of Continuous Glucose Monitoring Data.

Authors:  Teresa Henriques; Medha N Munshi; Alissa R Segal; Madalena D Costa; Ary L Goldberger
Journal:  J Diabetes Sci Technol       Date:  2014-03-02

Review 8.  Open access intrapartum CTG database.

Authors:  Václav Chudáček; Jiří Spilka; Miroslav Burša; Petr Janků; Lukáš Hruban; Michal Huptych; Lenka Lhotská
Journal:  BMC Pregnancy Childbirth       Date:  2014-01-13       Impact factor: 3.007

9.  Dynamical density delay maps: simple, new method for visualising the behaviour of complex systems.

Authors:  Anton Burykin; Madalena D Costa; Luca Citi; Ary L Goldberger
Journal:  BMC Med Inform Decis Mak       Date:  2014-01-18       Impact factor: 2.796

  9 in total
  1 in total

1.  Multiscale Poincaré plots for visualizing the structure of heartbeat time series.

Authors:  Teresa S Henriques; Sara Mariani; Anton Burykin; Filipa Rodrigues; Tiago F Silva; Ary L Goldberger
Journal:  BMC Med Inform Decis Mak       Date:  2016-02-09       Impact factor: 2.796

  1 in total

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