Literature DB >> 26011036

Structural studies of a thermophilic esterase from a new Planctomycetes species, Thermogutta terrifontis.

Christopher Sayer1, Michail N Isupov1, Elizaveta Bonch-Osmolovskaya2, Jennifer A Littlechild1.   

Abstract

Thermogutta terrifontis esterase (TtEst), a carboxyl esterase identified in the novel thermophilic bacterium T. terrifontis from the phylum Planctomycetes, has been cloned and over-expressed in Escherichia coli. The enzyme has been characterized biochemically and shown to have activity towards small p-nitrophenyl (pNP) carboxylic esters, with optimal activity for pNP-propionate. The enzyme retained 95% activity after incubation for 1 h at 80 °C. The crystal structures of the native TtEst and its complexes with the substrate analogue D-malate and the product acetate have been determined to high resolution. The bound ligands have allowed the identification of the carboxyl and alcohol binding pockets in the enzyme active site. Comparison of TtEst with structurally related enzymes provides insight into how differences in their catalytic activity can be rationalized based upon the properties of the amino acid residues in their active site pockets. The mutant enzymes L37A and L251A have been constructed to extend the substrate range of TtEst towards the larger butyrate and valerate pNP-esters. These mutant enzymes have also shown a significant increase in activity towards acetate and propionate pNP esters. A crystal structure of the L37A mutant was determined with the butyrate product bound in the carboxyl pocket of the active site. The mutant structure shows an expansion of the pocket that binds the substrate carboxyl group, which is consistent with the observed increase in activity towards pNP-butyrate.
© 2015 FEBS.

Entities:  

Keywords:  Planctomyces; X-ray structure; carboxyl esterase; site-directed mutagenesis; thermophile

Mesh:

Substances:

Year:  2015        PMID: 26011036     DOI: 10.1111/febs.13326

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  8 in total

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Journal:  Sci Rep       Date:  2016-05-10       Impact factor: 4.379

2.  Engineering of a thermostable esterase Est816 to improve its quorum-quenching activity and the underlying structural basis.

Authors:  Xiwen Liu; Li-Chuang Cao; Xin-Jiong Fan; Yu-Huan Liu; Wei Xie
Journal:  Sci Rep       Date:  2016-12-02       Impact factor: 4.379

Review 3.  Improving the 'tool box' for robust industrial enzymes.

Authors:  J A Littlechild
Journal:  J Ind Microbiol Biotechnol       Date:  2017-04-11       Impact factor: 3.346

4.  Crystal Structure of StnA for the Biosynthesis of Antitumor Drug Streptonigrin Reveals a Unique Substrate Binding Mode.

Authors:  Tianle Qian; Jing Wo; Yan Zhang; Quanwei Song; Guoqiang Feng; Ray Luo; Shuangjin Lin; Geng Wu; Hai-Feng Chen
Journal:  Sci Rep       Date:  2017-01-11       Impact factor: 4.379

5.  A Thermophilic Bacterial Esterase for Scavenging Nerve Agents: A Kinetic, Biophysical and Structural Study.

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Journal:  Molecules       Date:  2021-01-27       Impact factor: 4.411

6.  Engineering the Active Site Pocket to Enhance the Catalytic Efficiency of a Novel Feruloyl Esterase Derived From Human Intestinal Bacteria Dorea formicigenerans.

Authors:  Yang Shen; Yulu Wang; Xue Wei; Boting Wen; Shujun Liu; Huishuang Tan; Jingjian Zhang; Shuli Shao; Fengjiao Xin
Journal:  Front Bioeng Biotechnol       Date:  2022-06-20

7.  The Structure of a Novel Thermophilic Esterase from the Planctomycetes Species, Thermogutta terrifontis Reveals an Open Active Site Due to a Minimal 'Cap' Domain.

Authors:  Christopher Sayer; Zalan Szabo; Michail N Isupov; Colin Ingham; Jennifer A Littlechild
Journal:  Front Microbiol       Date:  2015-11-23       Impact factor: 5.640

Review 8.  Enzymes from Extreme Environments and Their Industrial Applications.

Authors:  Jennifer A Littlechild
Journal:  Front Bioeng Biotechnol       Date:  2015-10-13
  8 in total

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