Literature DB >> 26010322

FRAP, FLIM, and FRET: Detection and analysis of cellular dynamics on a molecular scale using fluorescence microscopy.

Carla De Los Santos1, Ching-Wei Chang2, Mary-Ann Mycek3, Richard A Cardullo1,4.   

Abstract

The combination of fluorescent-probe technology plus modern optical microscopes allows investigators to monitor dynamic events in living cells with exquisite temporal and spatial resolution. Fluorescence recovery after photobleaching (FRAP), for example, has long been used to monitor molecular dynamics both within cells and on cellular surfaces. Although bound by the diffraction limit imposed on all optical microscopes, the combination of digital cameras and the application of fluorescence intensity information on large-pixel arrays have allowed such dynamic information to be monitored and quantified. Fluorescence lifetime imaging microscopy (FLIM), on the other hand, utilizes the information from an ensemble of fluorophores to probe changes in the local environment. Using either fluorescence-intensity or lifetime approaches, fluorescence resonance energy transfer (FRET) microscopy provides information about molecular interactions, with Ångstrom resolution. In this review, we summarize the theoretical framework underlying these methods and illustrate their utility in addressing important problems in reproductive and developmental systems.
© 2015 Wiley Periodicals, Inc.

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Year:  2015        PMID: 26010322      PMCID: PMC4515154          DOI: 10.1002/mrd.22501

Source DB:  PubMed          Journal:  Mol Reprod Dev        ISSN: 1040-452X            Impact factor:   2.609


  100 in total

1.  Enhancing precision in time-domain fluorescence lifetime imaging.

Authors:  Ching-Wei Chang; Mary-Ann Mycek
Journal:  J Biomed Opt       Date:  2010 Sep-Oct       Impact factor: 3.170

2.  In vivo multiphoton microscopy of NADH and FAD redox states, fluorescence lifetimes, and cellular morphology in precancerous epithelia.

Authors:  Melissa C Skala; Kristin M Riching; Annette Gendron-Fitzpatrick; Jens Eickhoff; Kevin W Eliceiri; John G White; Nirmala Ramanujam
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-27       Impact factor: 11.205

Review 3.  FRET-based biosensors for protein kinases: illuminating the kinome.

Authors:  Jin Zhang; Michael D Allen
Journal:  Mol Biosyst       Date:  2007-08-21

4.  Engineering redox-sensitive linkers for genetically encoded FRET-based biosensors.

Authors:  Vladimir L Kolossov; Bryan Q Spring; Anna Sokolowski; John E Conour; Robert M Clegg; Paul J A Kenis; H Rex Gaskins
Journal:  Exp Biol Med (Maywood)       Date:  2008-02

5.  Improving membrane voltage measurements using FRET with new fluorescent proteins.

Authors:  Hidekazu Tsutsui; Satoshi Karasawa; Yasushi Okamura; Atsushi Miyawaki
Journal:  Nat Methods       Date:  2008-07-11       Impact factor: 28.547

6.  Fluorescence lifetime imaging microscopy for quantitative biological imaging.

Authors:  Leng-Chun Chen; William R Lloyd; Ching-Wei Chang; Dhruv Sud; Mary-Ann Mycek
Journal:  Methods Cell Biol       Date:  2013       Impact factor: 1.441

7.  Image analysis for denoising full-field frequency-domain fluorescence lifetime images.

Authors:  B Q Spring; R M Clegg
Journal:  J Microsc       Date:  2009-08       Impact factor: 1.758

8.  Comparing the quantification of Forster resonance energy transfer measurement accuracies based on intensity, spectral, and lifetime imaging.

Authors:  Serge Pelet; Michael J R Previte; Peter T C So
Journal:  J Biomed Opt       Date:  2006 May-Jun       Impact factor: 3.170

9.  Fluorescence lifetime-resolved pH imaging of living cells.

Authors:  Hai-Jui Lin; Petr Herman; Joseph R Lakowicz
Journal:  Cytometry A       Date:  2003-04       Impact factor: 4.355

10.  Measuring mechanical tension across vinculin reveals regulation of focal adhesion dynamics.

Authors:  Carsten Grashoff; Brenton D Hoffman; Michael D Brenner; Ruobo Zhou; Maddy Parsons; Michael T Yang; Mark A McLean; Stephen G Sligar; Christopher S Chen; Taekjip Ha; Martin A Schwartz
Journal:  Nature       Date:  2010-07-08       Impact factor: 49.962

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  12 in total

1.  Membrane fluidity is regulated by the C. elegans transmembrane protein FLD-1 and its human homologs TLCD1/2.

Authors:  Mario Ruiz; Rakesh Bodhicharla; Emma Svensk; Ranjan Devkota; Kiran Busayavalasa; Henrik Palmgren; Marcus Ståhlman; Jan Boren; Marc Pilon
Journal:  Elife       Date:  2018-12-04       Impact factor: 8.140

Review 2.  Fluorescence techniques in developmental biology.

Authors:  Sapthaswaran Veerapathiran; Thorsten Wohland
Journal:  J Biosci       Date:  2018-07       Impact factor: 1.826

3.  Mouse embryonic stem cell-derived cardiomyocytes cease to beat following exposure to monochromatic light: association with increased ROS and loss of calcium transients.

Authors:  Gurbind Singh; Divya Sridharan; Mahmood Khan; Polani B Seshagiri
Journal:  Am J Physiol Cell Physiol       Date:  2019-07-17       Impact factor: 4.249

4.  Single Molecule Tracking Nanoscopy Extended to Two Colors with MTT2col for the Analysis of Cell-Cell Interactions in Leukemia.

Authors:  Loriane Maillot; Magali Irla; Arnauld Sergé
Journal:  Bio Protoc       Date:  2022-04-20

Review 5.  Overview of the detection methods for equilibrium dissociation constant KD of drug-receptor interaction.

Authors:  Weina Ma; Liu Yang; Langchong He
Journal:  J Pharm Anal       Date:  2018-05-05

6.  Chromatin recruitment of OGG1 requires cohesin and mediator and is essential for efficient 8-oxoG removal.

Authors:  Emilie Lebraud; Guillaume Pinna; Capucine Siberchicot; Jordane Depagne; Didier Busso; Damiano Fantini; Lamya Irbah; Elena Robeska; Gueorgui Kratassiouk; Jean-Luc Ravanat; Bernd Epe; J Pablo Radicella; Anna Campalans
Journal:  Nucleic Acids Res       Date:  2020-09-18       Impact factor: 16.971

7.  Molecular mechanisms of heterogeneous oligomerization of huntingtin proteins.

Authors:  Silvia Bonfanti; Maria Chiara Lionetti; Maria Rita Fumagalli; Venkat R Chirasani; Guido Tiana; Nikolay V Dokholyan; Stefano Zapperi; Caterina A M La Porta
Journal:  Sci Rep       Date:  2019-05-20       Impact factor: 4.379

Review 8.  Fluorescence Microscopy-An Outline of Hardware, Biological Handling, and Fluorophore Considerations.

Authors:  Shane M Hickey; Ben Ung; Christie Bader; Robert Brooks; Joanna Lazniewska; Ian R D Johnson; Alexandra Sorvina; Jessica Logan; Carmela Martini; Courtney R Moore; Litsa Karageorgos; Martin J Sweetman; Douglas A Brooks
Journal:  Cells       Date:  2021-12-23       Impact factor: 6.600

Review 9.  The female gametophyte: an emerging model for cell type-specific systems biology in plant development.

Authors:  Marc W Schmid; Anja Schmidt; Ueli Grossniklaus
Journal:  Front Plant Sci       Date:  2015-11-03       Impact factor: 5.753

Review 10.  Computational Methods for Single-Cell Imaging and Omics Data Integration.

Authors:  Ebony Rose Watson; Atefeh Taherian Fard; Jessica Cara Mar
Journal:  Front Mol Biosci       Date:  2022-01-17
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