Literature DB >> 26010010

The three-dimensional structure of "Lonely Guy" from Claviceps purpurea provides insights into the phosphoribohydrolase function of Rossmann fold-containing lysine decarboxylase-like proteins.

Lenka Dzurová1, Federico Forneris2, Simone Savino2,3, Petr Galuszka1, Josef Vrabka1, Ivo Frébort1.   

Abstract

The recently discovered cytokinin (CK)-specific phosphoribohydrolase "Lonely Guy" (LOG) is a key enzyme of CK biosynthesis, converting inactive CK nucleotides into biologically active free bases. We have determined the crystal structures of LOG from Claviceps purpurea (cpLOG) and its complex with the enzymatic product phosphoribose. The structures reveal a dimeric arrangement of Rossmann folds, with the ligands bound to large pockets at the interface between cpLOG monomers. Structural comparisons highlight the homology of cpLOG to putative lysine decarboxylases. Extended sequence analysis enabled identification of a distinguishing LOG sequence signature. Taken together, our data suggest phosphoribohydrolase activity for several proteins of unknown function.
© 2015 Wiley Periodicals, Inc.

Entities:  

Keywords:  Claviceps purpurea; Rossmann fold; cytokinin; lysine decarboxylase; phosphoribohydrolase; protein lonely guy

Mesh:

Substances:

Year:  2015        PMID: 26010010     DOI: 10.1002/prot.24835

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  9 in total

1.  Manipulation of cytokinin level in the ergot fungus Claviceps purpurea emphasizes its contribution to virulence.

Authors:  Sabine Kind; Janine Hinsch; Josef Vrabka; Michaela Hradilová; Mária Majeská-Čudejková; Paul Tudzynski; Petr Galuszka
Journal:  Curr Genet       Date:  2018-05-30       Impact factor: 3.886

2.  A cytokinin-activation enzyme-like gene improves grain yield under various field conditions in rice.

Authors:  Changgui Wang; Guokui Wang; Yang Gao; Guihua Lu; Jeffrey E Habben; Guanfan Mao; Guangwu Chen; Jiantao Wang; Fan Yang; Xiaoqiang Zhao; Jing Zhang; Hua Mo; Pingping Qu; Junhua Liu; Thomas W Greene
Journal:  Plant Mol Biol       Date:  2019-12-23       Impact factor: 4.076

3.  An integrative in-silico approach for therapeutic target identification in the human pathogen Corynebacterium diphtheriae.

Authors:  Syed Babar Jamal; Syed Shah Hassan; Sandeep Tiwari; Marcus V Viana; Leandro de Jesus Benevides; Asad Ullah; Adrián G Turjanski; Debmalya Barh; Preetam Ghosh; Daniela Arruda Costa; Artur Silva; Richard Röttger; Jan Baumbach; Vasco A C Azevedo
Journal:  PLoS One       Date:  2017-10-19       Impact factor: 3.240

4.  Structural basis for a novel type of cytokinin-activating protein.

Authors:  Hogyun Seo; Kyung-Jin Kim
Journal:  Sci Rep       Date:  2017-04-04       Impact factor: 4.379

5.  The structure of the Moco carrier protein from Rippkaea orientalis.

Authors:  Joern Krausze; Thomas W Hercher; Archna Archna; Tobias Kruse
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2020-08-28       Impact factor: 1.056

6.  A Novel Subfamily of Bacterial AAT-Fold Basic Amino Acid Decarboxylases and Functional Characterization of Its First Representative: Pseudomonas aeruginosa LdcA.

Authors:  Diego Carriel; Pierre Simon Garcia; Florence Castelli; Patricia Lamourette; François Fenaille; Céline Brochier-Armanet; Sylvie Elsen; Irina Gutsche
Journal:  Genome Biol Evol       Date:  2018-11-01       Impact factor: 3.416

Review 7.  Biochemical and Structural Aspects of Cytokinin Biosynthesis and Degradation in Bacteria.

Authors:  Jitka Frébortová; Ivo Frébort
Journal:  Microorganisms       Date:  2021-06-16

8.  Structural basis for cytokinin production by LOG from Corynebacterium glutamicum.

Authors:  Hogyun Seo; Sangwoo Kim; Hye-Young Sagong; Hyeoncheol Francis Son; Kyeong Sik Jin; Il-Kwon Kim; Kyung-Jin Kim
Journal:  Sci Rep       Date:  2016-08-10       Impact factor: 4.379

Review 9.  The LONELY GUY gene family: from mosses to wheat, the key to the formation of active cytokinins in plants.

Authors:  Lei Chen; Geoffrey B Jameson; Yichu Guo; Jiancheng Song; Paula E Jameson
Journal:  Plant Biotechnol J       Date:  2022-03-01       Impact factor: 9.803

  9 in total

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