Literature DB >> 26006281

The complete mitochondrial genome of Eurasian water shrew (Neomys fodiens).

Zhitao Liu1, Wenge Zhao1, Peng Liu1, Shulan Li1, Chunzhu Xu2.   

Abstract

The complete mitogenome sequence of Eurasian water shrew (Neomys fodiens) was determined using long PCR. The genome was 17,260 bp in length and contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and 1 control region. The overall base composition of the heavy strand is A (33.0%), C (23.2%), T (30.9%) and G (12.9%). The base compositions present clearly the A-T skew, which is most obviously in the control region and protein-coding genes. The extended termination-associated sequence domain, the central conserved domain and the conserved sequence block domain are defined in the mitochondrial genome control region of Eurasian water shrew. Mitochondrial genomes analyses based on MP, ML, NJ and Bayesian analyses yielded identical phylogenetic trees. Neomys elegans, Soriculus fumidus, and N. fodiens formed a monophyletic group with the high bootstrap value (100%) in all examinations. This clade with the Anourosorex squamipes as the sister taxon to Sorex.

Entities:  

Keywords:  Control region; Eurasian water shrew; mitogenome; phylogenetic tree

Mesh:

Year:  2015        PMID: 26006281     DOI: 10.3109/19401736.2015.1028040

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  3 in total

1.  Sequencing and analysis of the complete mitochondrial genome of Chodsigoa hoffmanni from China and its phylogenetic analysis.

Authors:  Liu Zhu; Bai Yang; Sheng Yi; Zhang Qi; Cai He; Zhang Sheng; Li Jin-Xun; Wang Zhu
Journal:  Mitochondrial DNA B Resour       Date:  2019-07-12       Impact factor: 0.658

2.  Sequencing and analysis of the complete mitochondrial genome of Crocidura tanakae from China and its phylogenetic analysis.

Authors:  Jin Zhi-Min; Qin Ke-Song; Li Bo-Qi; Zhang Jun-Sheng; Cai He; Li Jin-Xun; Wang Zhu; Liu Zhu
Journal:  Mitochondrial DNA B Resour       Date:  2019-08-29       Impact factor: 0.658

3.  Sequencing and analysis of the complete mitochondrial genome of Blarinella griselda from China and its phylogenetic analysis.

Authors:  Liu Zhu; Yang Qiao-Jiang; Xu Chun-Yu; Wang Chen; Wang Qing-Qing; Jiang Wen-Jing
Journal:  Mitochondrial DNA B Resour       Date:  2020-02-02       Impact factor: 0.658

  3 in total

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