Literature DB >> 26003748

Evolution of bacterial transcription factors: how proteins take on new tasks, but do not always stop doing the old ones.

Sandhya S Visweswariah1, Stephen J W Busby2.   

Abstract

Many bacterial transcription factors do not behave as per the textbook operon model. We draw on whole genome work, as well as reported diversity across different bacteria, to argue that transcription factors may have evolved from nucleoid-associated proteins. This view would explain a large amount of recent data gleaned from high-throughput sequencing and bioinformatic analyses.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Keywords:  bacterial gene regulation; nucleoid associated proteins; transcription factors

Mesh:

Substances:

Year:  2015        PMID: 26003748     DOI: 10.1016/j.tim.2015.04.009

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  17 in total

1.  A response regulator promotes Francisella tularensis intramacrophage growth by repressing an anti-virulence factor.

Authors:  Kathryn M Ramsey; Simon L Dove
Journal:  Mol Microbiol       Date:  2016-06-10       Impact factor: 3.501

Review 2.  Redefining fundamental concepts of transcription initiation in bacteria.

Authors:  Citlalli Mejía-Almonte; Stephen J W Busby; Joseph T Wade; Jacques van Helden; Adam P Arkin; Gary D Stormo; Karen Eilbeck; Bernhard O Palsson; James E Galagan; Julio Collado-Vides
Journal:  Nat Rev Genet       Date:  2020-07-14       Impact factor: 53.242

Review 3.  Local and global regulation of transcription initiation in bacteria.

Authors:  Douglas F Browning; Stephen J W Busby
Journal:  Nat Rev Microbiol       Date:  2016-08-08       Impact factor: 60.633

Review 4.  Chromosomal organization of transcription: in a nutshell.

Authors:  Sam Meyer; Sylvie Reverchon; William Nasser; Georgi Muskhelishvili
Journal:  Curr Genet       Date:  2017-11-28       Impact factor: 3.886

5.  Application of Biolayer Interferometry (BLI) for Studying Protein-Protein Interactions in Transcription.

Authors:  Malhar Desai; Rong Di; Huizhou Fan
Journal:  J Vis Exp       Date:  2019-07-26       Impact factor: 1.355

6.  Metal-responsive promoter DNA compaction by the ferric uptake regulator.

Authors:  Davide Roncarati; Simone Pelliciari; Nicola Doniselli; Stefano Maggi; Andrea Vannini; Luca Valzania; Luca Mazzei; Barbara Zambelli; Claudio Rivetti; Alberto Danielli
Journal:  Nat Commun       Date:  2016-08-25       Impact factor: 14.919

7.  An Essential Regulatory System Originating from Polygenic Transcriptional Rewiring of PhoP-PhoQ of Xanthomonas campestris.

Authors:  Bao-Yu Peng; Yue Pan; Ru-Jiao Li; Jin-Wei Wei; Fang Liang; Li Wang; Fang-Fang Wang; Wei Qian
Journal:  Genetics       Date:  2017-05-26       Impact factor: 4.562

8.  A balancing act in transcription regulation by response regulators: titration of transcription factor activity by decoy DNA binding sites.

Authors:  Rong Gao; Libby J Helfant; Ti Wu; Zeyue Li; Samantha E Brokaw; Ann M Stock
Journal:  Nucleic Acids Res       Date:  2021-11-18       Impact factor: 16.971

Review 9.  Nucleoid-associated proteins shape chromatin structure and transcriptional regulation across the bacterial kingdom.

Authors:  Haley M Amemiya; Jeremy Schroeder; Peter L Freddolino
Journal:  Transcription       Date:  2021-09-09

10.  Evolution of a global regulator: Lrp in four orders of γ-Proteobacteria.

Authors:  Yvette Unoarumhi; Robert M Blumenthal; Jyl S Matson
Journal:  BMC Evol Biol       Date:  2016-05-20       Impact factor: 3.260

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