Literature DB >> 26001513

Spatio-temporal transcriptome analysis in the marine snail Tegula atra along central-northern Chile (28-31°S).

Fabian J Tapia1, Cristian Gallardo-Escárate2.   

Abstract

This study describes the results from transcriptomes sequenced by illumina technology from four populations in the marine snail Tegula atra along central-northern Chile (28-31°S) during summer and winter 2014. In silico differential expression of transcripts annotated to known proteins revealed several local patterns associated to the environmental thermal variability. Herein, northern populations evidenced lower number of genes highly regulated, while southern populations displayed opposite patterns. This relationship could suggest that northern snail populations are more adapted to high temperature variations, enabling specific genes (e.g. HSPs and antioxidant system) to maintain high transcriptional activity under controlled physiological conditions. This transcriptome response or "frontloading" strategy can significantly increase the speed of response to thermal stress, and also be a relevant molecular underpinning to explain the genomic diversity along the Chilean coast.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  RNA-Seq; Sequencing by synthesis; Snail; Tegula atra; Transcriptome

Mesh:

Substances:

Year:  2015        PMID: 26001513     DOI: 10.1016/j.margen.2015.05.005

Source DB:  PubMed          Journal:  Mar Genomics        ISSN: 1874-7787            Impact factor:   1.710


  2 in total

1.  De novo Transcriptome Generation and Annotation for Two Korean Endemic Land Snails, Aegista chejuensis and Aegista quelpartensis, Using Illumina Paired-End Sequencing Technology.

Authors:  Se Won Kang; Bharat Bhusan Patnaik; Hee-Ju Hwang; So Young Park; Tae Hun Wang; Eun Bi Park; Jong Min Chung; Dae Kwon Song; Hongray Howrelia Patnaik; Jae Bong Lee; Changmu Kim; Soonok Kim; Hong Seog Park; Jun Sang Lee; Yeon Soo Han; Yong Seok Lee
Journal:  Int J Mol Sci       Date:  2016-03-15       Impact factor: 5.923

2.  Signatures of local adaptation in the spatial genetic structure of the ascidian Pyura chilensis along the southeast Pacific coast.

Authors:  Nicolás I Segovia; Claudio A González-Wevar; Pilar A Haye
Journal:  Sci Rep       Date:  2020-08-24       Impact factor: 4.379

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.