Literature DB >> 25998503

Activity and anion inhibition studies of the α-carbonic anhydrase from Thiomicrospira crunogena XCL-2 Gammaproteobacterium.

Brian P Mahon1, Natalia A Díaz-Torres1, Melissa A Pinard1, Chingkuang Tu1, David N Silverman2, Kathleen M Scott3, Robert McKenna4.   

Abstract

Thiomicrospira crunogena XCL-2 expresses an α-carbonic anhydrase (TcruCA). Sequence alignments reveal that TcruCA displays a high sequence identity (>30%) relative to other α-CAs. This includes three conserved histidines that coordinate the active site zinc, a histidine proton shuttling residue, and opposing hydrophilic and hydrophobic sides that line the active site. The catalytic efficiency of TcruCA is considered moderate relative to other α-CAs (k(cat)/K(M)=1.1×10(7) M(-1) s(-1)), being a factor of ten less efficient than the most active α-CAs. TcruCA is also inhibited by anions with Cl(-), Br(-), and I(-), all showing Ki values in the millimolar range (53-361 mM). Hydrogen sulfide (HS(-)) revealed the highest affinity for TcruCA with a Ki of 1.1 μM. It is predicted that inhibition of TcruCA by HS(-) (an anion commonly found in the environment where Thiomicrospira crunogena is located) is a way for Thiomicrospira crunogena to regulate its carbon-concentrating mechanism (CCM) and thus the organism's metabolic functions. Results from this study provide preliminary insights into the role of TcruCA in the general metabolism of Thiomicrospira crunogena.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Anions; CO(2) hydration; Mesophile; Thiomicrospira crunogena XCL-2; α-Carbonic anhydrase

Mesh:

Substances:

Year:  2015        PMID: 25998503      PMCID: PMC5358508          DOI: 10.1016/j.bmcl.2015.05.001

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  25 in total

1.  The extremo-α-carbonic anhydrase from the thermophilic bacterium Sulfurihydrogenibium azorense is highly inhibited by sulfonamides.

Authors:  Daniela Vullo; Viviana De Luca; Andrea Scozzafava; Vincenzo Carginale; Mosè Rossi; Claudiu T Supuran; Clemente Capasso
Journal:  Bioorg Med Chem       Date:  2013-05-31       Impact factor: 3.641

2.  Biochemical properties of a novel and highly thermostable bacterial α-carbonic anhydrase from Sulfurihydrogenibium yellowstonense YO3AOP1.

Authors:  Clemente Capasso; Viviana De Luca; Vincenzo Carginale; Raffaele Cannio; Mosè Rossi
Journal:  J Enzyme Inhib Med Chem       Date:  2012-07-18       Impact factor: 5.051

3.  Structural and catalytic effects of proline substitution and surface loop deletion in the extended active site of human carbonic anhydrase II.

Authors:  Christopher D Boone; Valerio Rasi; Chingkuang Tu; Robert McKenna
Journal:  FEBS J       Date:  2015-03-23       Impact factor: 5.542

4.  Sulfurihydrogenibium yellowstonense sp. nov., an extremely thermophilic, facultatively heterotrophic, sulfur-oxidizing bacterium from Yellowstone National Park, and emended descriptions of the genus Sulfurihydrogenibium, Sulfurihydrogenibium subterraneum and Sulfurihydrogenibium azorense.

Authors:  S Nakagawa; Z Shtaih; A Banta; T J Beveridge; Y Sako; A-L Reysenbach
Journal:  Int J Syst Evol Microbiol       Date:  2005-11       Impact factor: 2.747

5.  Functional diversity, conservation, and convergence in the evolution of the alpha-, beta-, and gamma-carbonic anhydrase gene families.

Authors:  D Hewett-Emmett; R E Tashian
Journal:  Mol Phylogenet Evol       Date:  1996-02       Impact factor: 4.286

6.  Role of histidine 64 in the catalytic mechanism of human carbonic anhydrase II studied with a site-specific mutant.

Authors:  C K Tu; D N Silverman; C Forsman; B H Jonsson; S Lindskog
Journal:  Biochemistry       Date:  1989-09-19       Impact factor: 3.162

7.  Entrapment of carbon dioxide in the active site of carbonic anhydrase II.

Authors:  John F Domsic; Balendu Sankara Avvaru; Chae Un Kim; Sol M Gruner; Mavis Agbandje-McKenna; David N Silverman; Robert McKenna
Journal:  J Biol Chem       Date:  2008-09-02       Impact factor: 5.157

8.  Sulfurihydrogenibium azorense, sp. nov., a thermophilic hydrogen-oxidizing microaerophile from terrestrial hot springs in the Azores.

Authors:  P Aguiar; T J Beveridge; A-L Reysenbach
Journal:  Int J Syst Evol Microbiol       Date:  2004-01       Impact factor: 2.747

9.  Inorganic carbon acquisition by the hydrothermal vent tubeworm Riftia pachyptila depends upon high external PCO2 and upon proton-equivalent ion transport by the worm

Authors: 
Journal:  J Exp Biol       Date:  1997       Impact factor: 3.312

10.  The genome of deep-sea vent chemolithoautotroph Thiomicrospira crunogena XCL-2.

Authors:  Kathleen M Scott; Stefan M Sievert; Fereniki N Abril; Lois A Ball; Chantell J Barrett; Rodrigo A Blake; Amanda J Boller; Patrick S G Chain; Justine A Clark; Carisa R Davis; Chris Detter; Kimberly F Do; Kimberly P Dobrinski; Brandon I Faza; Kelly A Fitzpatrick; Sharyn K Freyermuth; Tara L Harmer; Loren J Hauser; Michael Hügler; Cheryl A Kerfeld; Martin G Klotz; William W Kong; Miriam Land; Alla Lapidus; Frank W Larimer; Dana L Longo; Susan Lucas; Stephanie A Malfatti; Steven E Massey; Darlene D Martin; Zoe McCuddin; Folker Meyer; Jessica L Moore; Luis H Ocampo; John H Paul; Ian T Paulsen; Douglas K Reep; Qinghu Ren; Rachel L Ross; Priscila Y Sato; Phaedra Thomas; Lance E Tinkham; Gary T Zeruth
Journal:  PLoS Biol       Date:  2006-11       Impact factor: 8.029

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