| Literature DB >> 25997783 |
Sabrina Royer1, Ana Luiza Souza Faria2, Liliane Miyuki Seki3, Thiago Pavoni Gomes Chagas3, Paola Amaral de Campos2, Deivid William da Fonseca Batistão2, Marise Dutra Asensi3, Paulo P Gontijo Filho2, Rosineide Marques Ribas2.
Abstract
BACKGROUND: In Brazil, ventilator-associated pneumonia (VAP) caused by carbapenem resistant Acinetobacter baumannii and Pseudomonas aeruginosa isolates are associated with significant mortality, morbidity and costs. Studies on the clonal relatedness of these isolates could lay the foundation for effective infection prevention and control programs.Entities:
Keywords: Acinetobacter baumannii; Intensive care unit; Molecular epidemiology; Multidrug-resistant
Mesh:
Substances:
Year: 2015 PMID: 25997783 PMCID: PMC9427451 DOI: 10.1016/j.bjid.2015.03.009
Source DB: PubMed Journal: Braz J Infect Dis ISSN: 1413-8670 Impact factor: 3.257
Specific primers used in this study.
| Gene | Sequence | Reference |
|---|---|---|
| F 5′-TAATGCTTTGATCGGCCTTG-3′ | 19 | |
| F 5′-GATCGGATTGGAGAACCAGA-3′ | 19 | |
| F 5′-GGTTAGTTGGCCCCCTTAAA-3′ | 19 | |
| F 5′-AAGTATTGGGGCTTGTGCTG-3′ | 19 | |
| F 5′-TGGCACTTTCAGCAGTTCCT-3′ | 18 | |
| F 5′-GAATAGRRTGGCTTAAYTCTC-3′ | 20 | |
| F 5′-GTTTGGTCGCATATCGCAAC-3′ | 20 | |
| F 5′-CTAAATCGAGAGCCCTGCTTG-3′ | 20 | |
| F 5′-TCAATTAGCTCTTGGGCTGAC-3′ | 20 | |
| F 5′-GTACAAGGGATTCGGCATCG-3′ | 20 |
Baseline patient characteristics, risk factors and outcome of VAP caused by A. baumannii vs. P. aeruginosa in the adult ICU of the UFU-HC.
| Characteristics | Microorganisms | RR (95% CI) | ||
|---|---|---|---|---|
| 49.89; ±16.84 | 58.97; ±19.46 | 0.064 | – | |
| Male | 21 (77.78) | 24 (80.00) | 0.837 | 0.9333 (0.4890–1.781) |
| Female | 6 (22.22) | 6 (20.00) | ||
| Clinical | 7 (25.92) | 21 (70.00) | 0.001 | 0.3625 (0.1824–0.7203) |
| Surgical | 2 (7.41) | 1 (3.33) | 0.599 | 1.440 (0.6153–3.370) |
| Trauma | 18 (66.67) | 8 (26.67) | 0.003 | 2.385 (1.299–4.377) |
| Smoking | 7 (25.92) | 11 (36.67) | 0.384 | 0.7583 (0.3939–1.460) |
| Alcoholism | 7 (25.92) | 6 (20.00) | 0.594 | 1.185 (0.6511–2.155) |
| Diabetes mellitus | 2 (7.41) | 6 (20.00) | 0.258 | 0.4900 (0.1430–1.679) |
| Heart failure | 6 (22.22) | 15 (50.00) | 0.030 | 0.4898 (0.2359–1.017) |
| Lung disease | 5 (18.52) | 4 (13.33) | 0.722 | 1.212 (0.6262–2.346) |
| Chronic renal failure | 5 (18.52) | 4 (13.33) | 0.722 | 1.212 (0.6262–2.346) |
| Old stroke | 0 (0.0) | 2 (6.66) | 0.493 | 0.0000 (–) |
| Malignancy | 0 (0.0) | 1 (3.33) | 1.000 | 0.0000 (–) |
| Traumatic brain injury | 8 (29.63) | 4 (13.33) | 0.195 | 1.579 (0.9328–2.673) |
| ASISb (>4) | 13 (48.15) | 6 (20.00) | 0.024 | 3.714 (1.152–11.98) |
| CPISc ≥ 6d | 8 (6–10) | 7 (6–10) | 0.342 | – |
| Tracheostomy | 21 (77.78) | 17 (56.67) | 0.091 | 1.750 (0.8508–3.600) |
| Hemodialysis | 3 (11.11) | 15 (50.00) | 0.002 | 0.2708 (0.09358–0.7838) |
| 20 (74.07) | 19 (63.33) | 0.384 | 1.319 (0.6849–2.539) | |
| 14 (51.85) | 7 (23.33) | 0.026 | 1.846 (1.087–3.135) | |
| Inappropriate | 21 (77.78) | 8 (26.67) | 0.000 | 3.379 (1.606–7.112) |
| Appropriate | 6 (22.22) | 22 (73.33) | ||
| ≥2 | 25 (92.59) | 25 (83.33) | 0.427 | 1.750 (0.5250–5.833) |
| Carbapenems | 10 (37.04) | 13 (43.33) | 0.629 | 0.8696 (0.4895–1.545) |
| Cephalosporins (3rd and 4th generation) | 25 (92.59) | 26 (86.67) | 0.673 | 1.471 (0.4583–4.719) |
| Aminoglycoside | 0 (0.0) | 1 (3.33) | 1.0000 | 0.0 (–) |
| Fluoroquinolones | 8 (29.63) | 7 (23.33) | 0.590 | 1.179 (0.6609–2.103) |
| Glycopeptides | 19 (70.37) | 19 (63.33) | 0.779 | 1.188 (0.6415–2.198) |
| Colistin | 0 (0.0) | 4 (13.33) | 0.114 | 0.0 (–) |
| Late | 20 (74.07) | 24 (80.00) | 0.594 | 0.8442 (0.4640–1.536) |
| Early | 7 (25.93) | 6 (20.00) | ||
| Length in ICU care before VAP (>7 days) | 11 (40.75) | 20 (66.67) | 0.050 | 0.5766 (0.3281–1.013) |
| Length in ICU care after VAP (>20 days) | 11 (40.75) | 11 (36.67) | 0.752 | 1.094 (0.6296–1.900) |
| ICU length of stay in days (>30) | 9 (33.33) | 13 (43.33) | 0.439 | 0.7955 (0.4380–1.445) |
| HC length of stay in days (>60) | 8 (29.63) | 11 (36.67) | 0.574 | 0.8421 (0.4549–1.559) |
| Mortality | 12 (44.44) | 19 (63.33) | 0.153 | 0.6710 (0.3863–1.165) |
aSD, standard deviation; bAverage Severity of Illness Score; cClinical Pulmonary Infection Score; dVariables expressed as median (range); eMultidrug-resistant; VAP, ventilator associated pneumonia; ICU, intensive care unit; UFU-HC, Uberlandia Federal University-Hospital Clinic; RR (CI), relative risk (confidence interval).
Multivariable regression analysis of risk factors for VAP caused by A. baumannii in patients interned in the adult ICU of UFU-HC.
| Variables | OR | 95% CI | |
|---|---|---|---|
| Trauma diagnosis admission | 7.2122 | 1.62–32.10 | 0.001 |
| ASISa (>4) | 3.7154 | 0.85–16.20 | 0.080 |
| MDRb pathogen | 0.6736 | 0.11–4.02 | 0.664 |
| Inappropriate antimicrobial therapy | 17.2911 | 2.61–114.50 | 0.003 |
aAverage Severity of Illness Score; bMultidrug-resistant; VAP, Ventilator associated pneumonia; ICU, intensive care unit; UFU-HC, Uberlandia Federal University-Hospital Clinic; OR, odds ratio; CI, confidence interval.
Multivariable regression analysis of risk factors for VAP caused by P. aeruginosa in patients interned in the adult ICU of UFU-HC.
| Variables | OR | 95% CI | |
|---|---|---|---|
| Clinical diagnosis admission | 0.2671 | 0.06–1.11 | 0.069 |
| Heart failure | 0.6279 | 0.14–2.88 | 0.549 |
| Hemodialysis | 0.1424 | 0.03–0.70 | 0.017 |
| Length in ICU care before VAP (>7) | 0.2913 | 0.08–1.11 | 0.071 |
VAP, ventilator associated pneumonia; ICU, intensive care unit; UFU-HC, Uberlandia Federal University-Hospital Clinic; OR, odds ratio; CI, confidence interval.
Analysis of phenotypic and genotypic characteristics of A. baumannii and P. aeruginosa isolates.
| Ab1 carbapenem-resistant/susceptible | MHT2 isolates analyzed/positive | PCR3 analyzed | PCR product size | Antibiotype (isolates) | Resistance profile (isolates) | Major Ab1 pulsotypes/ | Non-major Ab1 pulsotype/ |
|---|---|---|---|---|---|---|---|
| 17/29 (58.6)/12/29 (41.4) | 17 (100.0)/12 (70.6) | a12/17 (70.6) | 353pb/ | R1 (5) | AN; SAM; GEN; IPM; TGC | A/4 (80.0) | G/1 (20.0) |
| 501pb/ | R2 (3) | SAM; GEN; IPM; TGC | A/2 (66.7) | D/1 (33.3) | |||
| b02/17 (11.8) | R3 (1) | AN; SAM; GEN; IPM | A/1 (100.0) | – | |||
| 353pb/ | R4 (1) | AN; SAM; IPM | – | C/1 (100) | |||
| c03/17 (17.6) | 501pb/ | R5 (2) | SAM; GEN; IPM | A/2 (100.0) | – | ||
| R6 (2) | SAM; IPM | B/1 (50.0); C/1 (50.0) | |||||
| 353pb/ | R7 (1) | SAM | G/1 (100.0) | ||||
| R8 (2) | Multi-sensitive | F/1 (50.0); G/1 (50.0) | |||||
| 8/31 (25.8)/23/31 (74.2) | 8 (100.0)/6 (75.0) | 6 (75.0) | 353pb/ | R2 (1) | SAM; GEN; IPM; TGC | H/1 (100.0) | – |
| 501pb/ | R5 (4) | SAM; GEN; IPM | H/3 (75.0) | G/1 (25.0) | |||
| R6 (1) | SAM; IPM | – | E/1 (100.0) | ||||
1Acinetobacter baumannii; 2Modified Hodge Test; 3Polymerase chain reaction; 4Pseudomonas aeruginosa; 5Double Disk Synergy Test; a12 isolates positive for carbapenemase production (MHT); b2 isolates negative for carbapenemase production (MHT); c3 isolates carbapenem-susceptible; AN, amikacin; SAM, ampicillin/sulbactam; CIP, ciprofloxacin; FEP, cefepime; GEN, gentamicin; IPM, imipenem; MEM, meropenem; TGC, tigecycline; TZP, piperacillin/tazobactam.