| Literature DB >> 25995942 |
Joel T Mague1, Shaaban K Mohamed2, Mehmet Akkurt3, Antar A Abdelhamid4, Mustafa R Albayati5.
Abstract
In the title hydrate, C16H23BrN2O·2Entities:
Keywords: Schiff bases; crystal structure; hydrogen bonding; piperidines
Year: 2015 PMID: 25995942 PMCID: PMC4420100 DOI: 10.1107/S2056989015007471
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C16H23BrN2O·2H2O | |
| Monoclinic, | Cu |
| Cell parameters from 9702 reflections | |
| θ = 6.0–72.1° | |
| µ = 3.30 mm−1 | |
| β = 98.889 (1)° | |
| Column, pale yellow | |
| 0.34 × 0.09 × 0.08 mm |
| Bruker D8 VENTURE PHOTON 100 CMOS diffractometer | 3428 independent reflections |
| Radiation source: INCOATEC IµS micro–focus source | 3113 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4167 pixels mm-1 | θmax = 72.2°, θmin = 6.0° |
| ω scans | |
| Absorption correction: numerical ( | |
| 12901 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H-atom parameters constrained | |
| 3428 reflections | (Δ/σ)max = 0.002 |
| 204 parameters | Δρmax = 0.56 e Å−3 |
| 0 restraints | Δρmin = −0.67 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Br1 | 0.82893 (2) | 0.47282 (5) | 0.33146 (2) | 0.04137 (10) | |
| O1 | 0.69904 (4) | 0.0570 (2) | 0.41569 (10) | 0.0300 (3) | |
| H1A | 0.6835 | 0.1527 | 0.4080 | 0.056 (9)* | |
| N1 | 0.66823 (4) | 0.4316 (3) | 0.36510 (11) | 0.0236 (3) | |
| N2 | 0.56827 (4) | 0.6877 (2) | 0.37146 (10) | 0.0191 (3) | |
| H2A | 0.5586 | 0.5638 | 0.3912 | 0.023* | |
| C1 | 0.72738 (5) | 0.3664 (3) | 0.35750 (12) | 0.0224 (4) | |
| C2 | 0.72757 (5) | 0.1514 (3) | 0.39411 (12) | 0.0251 (4) | |
| C3 | 0.75833 (6) | 0.0340 (3) | 0.40982 (13) | 0.0301 (4) | |
| H3 | 0.7587 | −0.1111 | 0.4344 | 0.036* | |
| C4 | 0.78818 (5) | 0.1262 (4) | 0.39007 (13) | 0.0335 (5) | |
| H4 | 0.8089 | 0.0450 | 0.4008 | 0.040* | |
| C5 | 0.78768 (5) | 0.3385 (4) | 0.35440 (13) | 0.0288 (4) | |
| C6 | 0.75773 (5) | 0.4580 (3) | 0.33731 (12) | 0.0249 (4) | |
| H6 | 0.7577 | 0.6021 | 0.3119 | 0.030* | |
| C7 | 0.69657 (5) | 0.5031 (3) | 0.34611 (12) | 0.0215 (4) | |
| H7 | 0.6977 | 0.6497 | 0.3239 | 0.026* | |
| C8 | 0.63930 (4) | 0.5860 (3) | 0.35583 (12) | 0.0210 (4) | |
| H8 | 0.6465 | 0.7326 | 0.3343 | 0.025* | |
| C9 | 0.62799 (5) | 0.6125 (3) | 0.44904 (12) | 0.0215 (4) | |
| H9A | 0.6469 | 0.6795 | 0.4917 | 0.026* | |
| H9B | 0.6233 | 0.4646 | 0.4728 | 0.026* | |
| C10 | 0.59592 (4) | 0.7571 (3) | 0.44580 (12) | 0.0200 (4) | |
| C11 | 0.57716 (4) | 0.6334 (3) | 0.28012 (11) | 0.0196 (3) | |
| C12 | 0.60997 (5) | 0.4941 (3) | 0.28757 (12) | 0.0213 (4) | |
| H12A | 0.6049 | 0.3418 | 0.3058 | 0.026* | |
| H12B | 0.6173 | 0.4862 | 0.2269 | 0.026* | |
| C13 | 0.60480 (5) | 1.0012 (3) | 0.43633 (14) | 0.0249 (4) | |
| H13A | 0.6170 | 1.0200 | 0.3844 | 0.037* | |
| H13B | 0.6193 | 1.0512 | 0.4920 | 0.037* | |
| H13C | 0.5837 | 1.0889 | 0.4265 | 0.037* | |
| C14 | 0.58145 (5) | 0.7278 (3) | 0.53433 (12) | 0.0269 (4) | |
| H14A | 0.5617 | 0.8258 | 0.5342 | 0.040* | |
| H14B | 0.5990 | 0.7650 | 0.5860 | 0.040* | |
| H14C | 0.5743 | 0.5740 | 0.5397 | 0.040* | |
| C15 | 0.58037 (5) | 0.8434 (3) | 0.22423 (12) | 0.0247 (4) | |
| H15A | 0.5606 | 0.9394 | 0.2272 | 0.037* | |
| H15B | 0.5811 | 0.8031 | 0.1607 | 0.037* | |
| H15C | 0.6014 | 0.9218 | 0.2491 | 0.037* | |
| C16 | 0.54701 (5) | 0.4976 (3) | 0.23218 (13) | 0.0252 (4) | |
| H16A | 0.5435 | 0.3684 | 0.2694 | 0.038* | |
| H16B | 0.5519 | 0.4485 | 0.1727 | 0.038* | |
| H16C | 0.5263 | 0.5889 | 0.2237 | 0.038* | |
| O2 | 0.51008 (4) | 0.9736 (2) | 0.35246 (11) | 0.0331 (3) | 0.5 |
| H2B | 0.5278 | 0.8954 | 0.3562 | 0.040* | 0.5 |
| H2C | 0.5038 | 1.0005 | 0.2970 | 0.040* | 0.5 |
| O3 | 0.51664 (4) | 0.2904 (3) | 0.49776 (11) | 0.0399 (4) | 0.5 |
| H3A | 0.5127 | 0.2158 | 0.5427 | 0.048* | 0.5 |
| H3B | 0.5124 | 0.2081 | 0.4519 | 0.048* | 0.5 |
| O2A | 0.51008 (4) | 0.9736 (2) | 0.35246 (11) | 0.0331 (3) | 0.5 |
| H2BA | 0.5278 | 0.8954 | 0.3562 | 0.040* | 0.5 |
| H2D | 0.5105 | 1.0762 | 0.3907 | 0.040* | 0.5 |
| O3A | 0.51664 (4) | 0.2904 (3) | 0.49776 (11) | 0.0399 (4) | 0.5 |
| H3AA | 0.5127 | 0.2158 | 0.5427 | 0.048* | 0.5 |
| H3C | 0.5069 | 0.4131 | 0.5000 | 0.048* | 0.5 |
| Br1 | 0.01904 (12) | 0.06914 (19) | 0.03582 (14) | −0.00163 (10) | 0.00390 (9) | −0.01717 (11) |
| O1 | 0.0346 (8) | 0.0241 (7) | 0.0318 (7) | 0.0020 (6) | 0.0068 (6) | 0.0023 (6) |
| N1 | 0.0216 (8) | 0.0231 (8) | 0.0259 (8) | 0.0039 (6) | 0.0034 (6) | 0.0019 (6) |
| N2 | 0.0191 (7) | 0.0207 (7) | 0.0184 (7) | −0.0018 (6) | 0.0054 (5) | −0.0001 (6) |
| C1 | 0.0228 (9) | 0.0258 (9) | 0.0183 (8) | 0.0036 (7) | 0.0017 (6) | −0.0033 (7) |
| C2 | 0.0311 (10) | 0.0250 (9) | 0.0186 (8) | 0.0045 (8) | 0.0015 (7) | −0.0035 (7) |
| C3 | 0.0393 (11) | 0.0286 (10) | 0.0215 (9) | 0.0126 (9) | 0.0013 (8) | −0.0015 (8) |
| C4 | 0.0306 (10) | 0.0446 (12) | 0.0234 (10) | 0.0181 (9) | −0.0020 (8) | −0.0067 (9) |
| C5 | 0.0206 (9) | 0.0421 (12) | 0.0227 (9) | 0.0039 (8) | 0.0003 (7) | −0.0109 (8) |
| C6 | 0.0228 (9) | 0.0308 (10) | 0.0207 (9) | 0.0024 (8) | 0.0023 (7) | −0.0047 (7) |
| C7 | 0.0227 (9) | 0.0216 (9) | 0.0202 (8) | 0.0033 (7) | 0.0028 (7) | 0.0020 (7) |
| C8 | 0.0188 (8) | 0.0189 (8) | 0.0257 (9) | 0.0025 (7) | 0.0044 (7) | 0.0041 (7) |
| C9 | 0.0226 (9) | 0.0200 (8) | 0.0211 (9) | 0.0010 (7) | 0.0014 (7) | 0.0017 (7) |
| C10 | 0.0213 (8) | 0.0206 (9) | 0.0181 (8) | −0.0001 (7) | 0.0034 (6) | 0.0003 (7) |
| C11 | 0.0188 (8) | 0.0224 (9) | 0.0182 (8) | −0.0002 (7) | 0.0046 (6) | −0.0001 (7) |
| C12 | 0.0227 (9) | 0.0211 (9) | 0.0206 (8) | 0.0023 (7) | 0.0051 (7) | 0.0007 (7) |
| C13 | 0.0262 (10) | 0.0188 (9) | 0.0288 (10) | −0.0001 (7) | 0.0018 (7) | −0.0007 (7) |
| C14 | 0.0313 (10) | 0.0302 (10) | 0.0201 (9) | −0.0013 (8) | 0.0070 (7) | −0.0011 (8) |
| C15 | 0.0235 (9) | 0.0289 (10) | 0.0226 (9) | 0.0030 (7) | 0.0066 (7) | 0.0055 (8) |
| C16 | 0.0220 (9) | 0.0305 (10) | 0.0232 (9) | −0.0017 (7) | 0.0041 (7) | −0.0048 (7) |
| O2 | 0.0281 (7) | 0.0337 (8) | 0.0376 (8) | 0.0058 (6) | 0.0050 (6) | −0.0057 (6) |
| O3 | 0.0444 (9) | 0.0318 (8) | 0.0450 (9) | −0.0004 (7) | 0.0113 (7) | −0.0064 (7) |
| O2A | 0.0281 (7) | 0.0337 (8) | 0.0376 (8) | 0.0058 (6) | 0.0050 (6) | −0.0057 (6) |
| O3A | 0.0444 (9) | 0.0318 (8) | 0.0450 (9) | −0.0004 (7) | 0.0113 (7) | −0.0064 (7) |
| Br1—C5 | 1.902 (2) | C10—C13 | 1.530 (2) |
| O1—C2 | 1.348 (2) | C11—C16 | 1.532 (2) |
| O1—H1A | 0.8400 | C11—C15 | 1.534 (2) |
| N1—C7 | 1.275 (2) | C11—C12 | 1.538 (2) |
| N1—C8 | 1.468 (2) | C12—H12A | 0.9900 |
| N2—C10 | 1.491 (2) | C12—H12B | 0.9900 |
| N2—C11 | 1.491 (2) | C13—H13A | 0.9800 |
| N2—H2A | 0.9099 | C13—H13B | 0.9800 |
| C1—C6 | 1.398 (3) | C13—H13C | 0.9800 |
| C1—C2 | 1.409 (3) | C14—H14A | 0.9800 |
| C1—C7 | 1.463 (2) | C14—H14B | 0.9800 |
| C2—C3 | 1.399 (3) | C14—H14C | 0.9800 |
| C3—C4 | 1.379 (3) | C15—H15A | 0.9800 |
| C3—H3 | 0.9500 | C15—H15B | 0.9800 |
| C4—C5 | 1.388 (3) | C15—H15C | 0.9800 |
| C4—H4 | 0.9500 | C16—H16A | 0.9800 |
| C5—C6 | 1.379 (3) | C16—H16B | 0.9800 |
| C6—H6 | 0.9500 | C16—H16C | 0.9800 |
| C7—H7 | 0.9500 | O2—H2B | 0.8400 |
| C8—C12 | 1.525 (3) | O2—H2C | 0.8400 |
| C8—C9 | 1.529 (2) | O3—H3A | 0.8399 |
| C8—H8 | 1.0000 | O3—H3B | 0.8400 |
| C9—C10 | 1.537 (2) | O2A—H2BA | 0.8400 |
| C9—H9A | 0.9900 | O2A—H2D | 0.8400 |
| C9—H9B | 0.9900 | O3A—H3AA | 0.8399 |
| C10—C14 | 1.525 (2) | O3A—H3C | 0.8401 |
| C2—O1—H1A | 107.4 | C14—C10—C9 | 109.03 (15) |
| C7—N1—C8 | 117.69 (15) | C13—C10—C9 | 110.57 (15) |
| C10—N2—C11 | 119.17 (13) | N2—C11—C16 | 105.38 (14) |
| C10—N2—H2A | 106.8 | N2—C11—C15 | 111.20 (14) |
| C11—N2—H2A | 106.4 | C16—C11—C15 | 108.43 (15) |
| C6—C1—C2 | 119.71 (17) | N2—C11—C12 | 111.77 (14) |
| C6—C1—C7 | 118.73 (17) | C16—C11—C12 | 109.21 (15) |
| C2—C1—C7 | 121.42 (17) | C15—C11—C12 | 110.66 (14) |
| O1—C2—C3 | 119.07 (18) | C8—C12—C11 | 113.38 (14) |
| O1—C2—C1 | 121.87 (17) | C8—C12—H12A | 108.9 |
| C3—C2—C1 | 119.06 (19) | C11—C12—H12A | 108.9 |
| C4—C3—C2 | 120.81 (19) | C8—C12—H12B | 108.9 |
| C4—C3—H3 | 119.6 | C11—C12—H12B | 108.9 |
| C2—C3—H3 | 119.6 | H12A—C12—H12B | 107.7 |
| C3—C4—C5 | 119.57 (18) | C10—C13—H13A | 109.5 |
| C3—C4—H4 | 120.2 | C10—C13—H13B | 109.5 |
| C5—C4—H4 | 120.2 | H13A—C13—H13B | 109.5 |
| C6—C5—C4 | 121.09 (19) | C10—C13—H13C | 109.5 |
| C6—C5—Br1 | 118.76 (17) | H13A—C13—H13C | 109.5 |
| C4—C5—Br1 | 120.12 (15) | H13B—C13—H13C | 109.5 |
| C5—C6—C1 | 119.75 (19) | C10—C14—H14A | 109.5 |
| C5—C6—H6 | 120.1 | C10—C14—H14B | 109.5 |
| C1—C6—H6 | 120.1 | H14A—C14—H14B | 109.5 |
| N1—C7—C1 | 122.01 (17) | C10—C14—H14C | 109.5 |
| N1—C7—H7 | 119.0 | H14A—C14—H14C | 109.5 |
| C1—C7—H7 | 119.0 | H14B—C14—H14C | 109.5 |
| N1—C8—C12 | 109.52 (15) | C11—C15—H15A | 109.5 |
| N1—C8—C9 | 108.38 (14) | C11—C15—H15B | 109.5 |
| C12—C8—C9 | 109.97 (14) | H15A—C15—H15B | 109.5 |
| N1—C8—H8 | 109.6 | C11—C15—H15C | 109.5 |
| C12—C8—H8 | 109.6 | H15A—C15—H15C | 109.5 |
| C9—C8—H8 | 109.6 | H15B—C15—H15C | 109.5 |
| C8—C9—C10 | 112.81 (14) | C11—C16—H16A | 109.5 |
| C8—C9—H9A | 109.0 | C11—C16—H16B | 109.5 |
| C10—C9—H9A | 109.0 | H16A—C16—H16B | 109.5 |
| C8—C9—H9B | 109.0 | C11—C16—H16C | 109.5 |
| C10—C9—H9B | 109.0 | H16A—C16—H16C | 109.5 |
| H9A—C9—H9B | 107.8 | H16B—C16—H16C | 109.5 |
| N2—C10—C14 | 106.03 (14) | H2B—O2—H2C | 106.9 |
| N2—C10—C13 | 110.90 (14) | H3A—O3—H3B | 106.7 |
| C14—C10—C13 | 108.29 (15) | H2BA—O2A—H2D | 116.2 |
| N2—C10—C9 | 111.84 (14) | H3AA—O3A—H3C | 107.5 |
| C6—C1—C2—O1 | 179.19 (17) | C7—N1—C8—C9 | −119.20 (18) |
| C7—C1—C2—O1 | 3.7 (3) | N1—C8—C9—C10 | −175.48 (14) |
| C6—C1—C2—C3 | 0.2 (3) | C12—C8—C9—C10 | −55.78 (19) |
| C7—C1—C2—C3 | −175.29 (17) | C11—N2—C10—C14 | −162.17 (15) |
| O1—C2—C3—C4 | −178.91 (17) | C11—N2—C10—C13 | 80.49 (19) |
| C1—C2—C3—C4 | 0.1 (3) | C11—N2—C10—C9 | −43.4 (2) |
| C2—C3—C4—C5 | 0.2 (3) | C8—C9—C10—N2 | 49.0 (2) |
| C3—C4—C5—C6 | −0.8 (3) | C8—C9—C10—C14 | 165.96 (15) |
| C3—C4—C5—Br1 | 177.42 (15) | C8—C9—C10—C13 | −75.08 (19) |
| C4—C5—C6—C1 | 1.1 (3) | C10—N2—C11—C16 | 161.25 (15) |
| Br1—C5—C6—C1 | −177.13 (13) | C10—N2—C11—C15 | −81.47 (18) |
| C2—C1—C6—C5 | −0.8 (3) | C10—N2—C11—C12 | 42.7 (2) |
| C7—C1—C6—C5 | 174.83 (16) | N1—C8—C12—C11 | 174.37 (14) |
| C8—N1—C7—C1 | 176.84 (16) | C9—C8—C12—C11 | 55.37 (19) |
| C6—C1—C7—N1 | −178.48 (17) | N2—C11—C12—C8 | −48.0 (2) |
| C2—C1—C7—N1 | −2.9 (3) | C16—C11—C12—C8 | −164.17 (15) |
| C7—N1—C8—C12 | 120.82 (18) | C15—C11—C12—C8 | 76.55 (18) |
| H··· | ||||
| O1—H1 | 0.84 | 1.87 | 2.628 (2) | 149 |
| O2—H2 | 0.84 | 2.02 | 2.861 (2) | 175 |
| O3—H3 | 0.84 | 2.24 | 3.059 (2) | 167 |
| O3—H3 | 0.84 | 2.04 | 2.869 (2) | 168 |
| O2 | 0.84 | 2.02 | 2.861 (2) | 175 |
| O2 | 0.84 | 2.04 | 2.869 (2) | 170 |
| O3 | 0.84 | 2.24 | 3.059 (2) | 167 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O1H1 | 0.84 | 1.87 | 2.628(2) | 149 |
| O2H2 | 0.84 | 2.02 | 2.861(2) | 175 |
| O3H3 | 0.84 | 2.24 | 3.059(2) | 167 |
| O3H3 | 0.84 | 2.04 | 2.869(2) | 168 |
| O2 | 0.84 | 2.02 | 2.861(2) | 175 |
| O2 | 0.84 | 2.04 | 2.869(2) | 170 |
| O3 | 0.84 | 2.24 | 3.059(2) | 167 |
Symmetry codes: (i) ; (ii) ; (iii) .