| Literature DB >> 25995913 |
Hasna Yassine1, Mostafa Khouili1, Lahcen El Ammari2, Mohamed Saadi2, El Mostafa Ketatni3.
Abstract
In the title compound, C17H16N2O5, the dihedral angles between the centralEntities:
Keywords: crystal structure; hydrogen bonding; urea derivative
Year: 2015 PMID: 25995913 PMCID: PMC4420073 DOI: 10.1107/S2056989015006465
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C17H16N2O5 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3364 reflections |
| θ = 2.4–26.7° | |
| µ = 0.10 mm−1 | |
| β = 93.66 (4)° | Block, yellow |
| 0.42 × 0.36 × 0.29 mm | |
| Bruker X8 APEXII CCD diffractometer | 3364 independent reflections |
| Radiation source: fine-focus sealed tube | 1667 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 26.7°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 11500 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3364 reflections | Δρmax = 0.21 e Å−3 |
| 220 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0052 (11) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.8216 (3) | 0.50547 (11) | 0.6105 (4) | 0.0617 (8) | |
| H1A | 0.8796 | 0.5351 | 0.5624 | 0.093* | |
| H1B | 0.8023 | 0.4772 | 0.5194 | 0.093* | |
| H1C | 0.8755 | 0.4891 | 0.7136 | 0.093* | |
| C2 | 0.5813 (3) | 0.49037 (10) | 0.7155 (3) | 0.0413 (6) | |
| C3 | 0.4424 (2) | 0.51598 (9) | 0.7748 (3) | 0.0370 (6) | |
| C4 | 0.4261 (3) | 0.57446 (9) | 0.7763 (3) | 0.0463 (6) | |
| H4 | 0.5028 | 0.5968 | 0.7377 | 0.056* | |
| C5 | 0.3000 (3) | 0.59993 (10) | 0.8334 (3) | 0.0524 (7) | |
| H5 | 0.2913 | 0.6389 | 0.8324 | 0.063* | |
| C6 | 0.1861 (3) | 0.56676 (10) | 0.8925 (3) | 0.0496 (7) | |
| H6 | 0.1012 | 0.5837 | 0.9328 | 0.060* | |
| C7 | 0.1975 (3) | 0.50878 (9) | 0.8921 (3) | 0.0421 (6) | |
| H7 | 0.1199 | 0.4871 | 0.9315 | 0.050* | |
| C8 | 0.3249 (3) | 0.48226 (9) | 0.8331 (3) | 0.0377 (6) | |
| C9 | 0.2326 (3) | 0.38375 (10) | 0.8583 (3) | 0.0429 (6) | |
| C10 | 0.2281 (3) | 0.27870 (9) | 0.8808 (3) | 0.0420 (6) | |
| C11 | 0.0793 (3) | 0.27180 (10) | 0.8152 (3) | 0.0519 (7) | |
| H11 | 0.0219 | 0.3031 | 0.7827 | 0.062* | |
| C12 | 0.0181 (3) | 0.21894 (11) | 0.7988 (4) | 0.0607 (8) | |
| H12 | −0.0800 | 0.2150 | 0.7535 | 0.073* | |
| C13 | 0.0991 (3) | 0.17166 (11) | 0.8482 (4) | 0.0627 (8) | |
| H13 | 0.0560 | 0.1362 | 0.8371 | 0.075* | |
| C14 | 0.2450 (3) | 0.17759 (10) | 0.9142 (3) | 0.0511 (7) | |
| H14 | 0.2997 | 0.1457 | 0.9478 | 0.061* | |
| C15 | 0.3129 (3) | 0.23038 (9) | 0.9319 (3) | 0.0407 (6) | |
| C16 | 0.4711 (3) | 0.23461 (10) | 1.0022 (3) | 0.0460 (6) | |
| C17 | 0.6894 (3) | 0.18555 (11) | 1.1114 (4) | 0.0695 (9) | |
| H17A | 0.6980 | 0.2026 | 1.2292 | 0.104* | |
| H17B | 0.7470 | 0.2066 | 1.0300 | 0.104* | |
| H17C | 0.7258 | 0.1477 | 1.1196 | 0.104* | |
| N2 | 0.2964 (2) | 0.33173 (7) | 0.8915 (3) | 0.0472 (5) | |
| H2N | 0.3903 | 0.3306 | 0.9209 | 0.057* | |
| N3 | 0.3414 (2) | 0.42374 (7) | 0.8385 (3) | 0.0443 (5) | |
| H3N | 0.4311 | 0.4140 | 0.8169 | 0.053* | |
| O1 | 0.68143 (18) | 0.52810 (7) | 0.6650 (2) | 0.0536 (5) | |
| O2 | 0.60738 (18) | 0.44002 (7) | 0.7108 (2) | 0.0557 (5) | |
| O3 | 0.0994 (2) | 0.39320 (7) | 0.8476 (3) | 0.0692 (6) | |
| O4 | 0.5330 (2) | 0.18523 (7) | 1.0436 (3) | 0.0618 (5) | |
| O5 | 0.5419 (2) | 0.27802 (7) | 1.0207 (3) | 0.0710 (6) |
| C1 | 0.0386 (16) | 0.080 (2) | 0.0678 (19) | −0.0038 (14) | 0.0124 (14) | 0.0022 (15) |
| C2 | 0.0424 (15) | 0.0422 (15) | 0.0387 (14) | −0.0047 (12) | −0.0025 (12) | 0.0035 (11) |
| C3 | 0.0377 (14) | 0.0362 (13) | 0.0364 (13) | −0.0004 (11) | −0.0018 (11) | 0.0031 (10) |
| C4 | 0.0503 (16) | 0.0346 (13) | 0.0536 (16) | −0.0020 (12) | 0.0010 (13) | 0.0064 (11) |
| C5 | 0.0583 (18) | 0.0350 (14) | 0.0638 (18) | 0.0053 (13) | 0.0029 (14) | −0.0007 (12) |
| C6 | 0.0504 (16) | 0.0481 (15) | 0.0501 (16) | 0.0133 (13) | 0.0017 (13) | −0.0014 (12) |
| C7 | 0.0438 (15) | 0.0390 (14) | 0.0435 (15) | 0.0014 (12) | 0.0039 (12) | 0.0005 (11) |
| C8 | 0.0414 (14) | 0.0359 (13) | 0.0352 (13) | 0.0003 (11) | −0.0029 (11) | 0.0003 (10) |
| C9 | 0.0443 (16) | 0.0388 (14) | 0.0465 (15) | −0.0055 (12) | 0.0091 (12) | 0.0008 (11) |
| C10 | 0.0484 (16) | 0.0390 (14) | 0.0396 (14) | −0.0089 (12) | 0.0111 (12) | 0.0001 (10) |
| C11 | 0.0528 (18) | 0.0471 (16) | 0.0561 (17) | −0.0068 (13) | 0.0063 (14) | 0.0036 (12) |
| C12 | 0.0591 (19) | 0.0541 (18) | 0.0686 (19) | −0.0156 (15) | 0.0011 (15) | −0.0027 (14) |
| C13 | 0.066 (2) | 0.0463 (16) | 0.076 (2) | −0.0211 (15) | 0.0036 (16) | −0.0101 (14) |
| C14 | 0.0626 (19) | 0.0346 (14) | 0.0570 (17) | −0.0066 (13) | 0.0117 (14) | −0.0041 (12) |
| C15 | 0.0467 (15) | 0.0362 (13) | 0.0404 (14) | −0.0069 (11) | 0.0115 (12) | −0.0024 (10) |
| C16 | 0.0584 (18) | 0.0328 (14) | 0.0480 (16) | −0.0052 (13) | 0.0128 (13) | 0.0008 (11) |
| C17 | 0.0476 (18) | 0.0535 (17) | 0.107 (3) | 0.0005 (14) | 0.0035 (17) | 0.0059 (16) |
| N2 | 0.0441 (12) | 0.0362 (11) | 0.0614 (14) | −0.0054 (10) | 0.0046 (11) | 0.0055 (10) |
| N3 | 0.0384 (12) | 0.0321 (11) | 0.0632 (14) | 0.0010 (9) | 0.0094 (10) | 0.0043 (9) |
| O1 | 0.0435 (11) | 0.0497 (10) | 0.0688 (12) | −0.0056 (8) | 0.0134 (9) | 0.0033 (8) |
| O2 | 0.0486 (11) | 0.0416 (10) | 0.0780 (13) | 0.0030 (9) | 0.0137 (9) | −0.0019 (9) |
| O3 | 0.0417 (11) | 0.0492 (11) | 0.1177 (18) | −0.0013 (9) | 0.0138 (11) | −0.0042 (10) |
| O4 | 0.0544 (12) | 0.0369 (10) | 0.0938 (15) | −0.0016 (9) | 0.0033 (10) | 0.0022 (9) |
| O5 | 0.0606 (13) | 0.0380 (11) | 0.1121 (17) | −0.0105 (9) | −0.0126 (12) | 0.0073 (10) |
| C1—O1 | 1.453 (3) | C10—N2 | 1.404 (3) |
| C1—H1A | 0.9600 | C10—C11 | 1.405 (4) |
| C1—H1B | 0.9600 | C10—C15 | 1.418 (3) |
| C1—H1C | 0.9600 | C11—C12 | 1.376 (3) |
| C2—O2 | 1.222 (3) | C11—H11 | 0.9300 |
| C2—O1 | 1.342 (3) | C12—C13 | 1.377 (4) |
| C2—C3 | 1.483 (3) | C12—H12 | 0.9300 |
| C3—C4 | 1.400 (3) | C13—C14 | 1.379 (4) |
| C3—C8 | 1.417 (3) | C13—H13 | 0.9300 |
| C4—C5 | 1.378 (3) | C14—C15 | 1.400 (3) |
| C4—H4 | 0.9300 | C14—H14 | 0.9300 |
| C5—C6 | 1.387 (3) | C15—C16 | 1.489 (4) |
| C5—H5 | 0.9300 | C16—O5 | 1.217 (3) |
| C6—C7 | 1.384 (3) | C16—O4 | 1.328 (3) |
| C6—H6 | 0.9300 | C17—O4 | 1.465 (3) |
| C7—C8 | 1.403 (3) | C17—H17A | 0.9600 |
| C7—H7 | 0.9300 | C17—H17B | 0.9600 |
| C8—N3 | 1.401 (3) | C17—H17C | 0.9600 |
| C9—O3 | 1.218 (3) | N2—H2N | 0.8600 |
| C9—N2 | 1.381 (3) | N3—H3N | 0.8646 |
| C9—N3 | 1.381 (3) | ||
| O1—C1—H1A | 109.5 | C12—C11—C10 | 120.3 (2) |
| O1—C1—H1B | 109.5 | C12—C11—H11 | 119.8 |
| H1A—C1—H1B | 109.5 | C10—C11—H11 | 119.8 |
| O1—C1—H1C | 109.5 | C11—C12—C13 | 121.4 (3) |
| H1A—C1—H1C | 109.5 | C11—C12—H12 | 119.3 |
| H1B—C1—H1C | 109.5 | C13—C12—H12 | 119.3 |
| O2—C2—O1 | 121.0 (2) | C12—C13—C14 | 119.1 (2) |
| O2—C2—C3 | 125.3 (2) | C12—C13—H13 | 120.5 |
| O1—C2—C3 | 113.7 (2) | C14—C13—H13 | 120.5 |
| C4—C3—C8 | 118.7 (2) | C13—C14—C15 | 121.7 (2) |
| C4—C3—C2 | 120.1 (2) | C13—C14—H14 | 119.2 |
| C8—C3—C2 | 121.2 (2) | C15—C14—H14 | 119.2 |
| C5—C4—C3 | 121.9 (2) | C14—C15—C10 | 118.6 (2) |
| C5—C4—H4 | 119.0 | C14—C15—C16 | 119.7 (2) |
| C3—C4—H4 | 119.0 | C10—C15—C16 | 121.7 (2) |
| C4—C5—C6 | 119.1 (2) | O5—C16—O4 | 121.1 (3) |
| C4—C5—H5 | 120.4 | O5—C16—C15 | 125.4 (2) |
| C6—C5—H5 | 120.4 | O4—C16—C15 | 113.5 (2) |
| C7—C6—C5 | 120.7 (2) | O4—C17—H17A | 109.5 |
| C7—C6—H6 | 119.6 | O4—C17—H17B | 109.5 |
| C5—C6—H6 | 119.6 | H17A—C17—H17B | 109.5 |
| C6—C7—C8 | 120.8 (2) | O4—C17—H17C | 109.5 |
| C6—C7—H7 | 119.6 | H17A—C17—H17C | 109.5 |
| C8—C7—H7 | 119.6 | H17B—C17—H17C | 109.5 |
| N3—C8—C7 | 121.7 (2) | C9—N2—C10 | 128.3 (2) |
| N3—C8—C3 | 119.4 (2) | C9—N2—H2N | 117.6 |
| C7—C8—C3 | 118.7 (2) | C10—N2—H2N | 114.0 |
| O3—C9—N2 | 125.1 (2) | C9—N3—C8 | 127.8 (2) |
| O3—C9—N3 | 124.7 (2) | C9—N3—H3N | 120.8 |
| N2—C9—N3 | 110.3 (2) | C8—N3—H3N | 111.1 |
| N2—C10—C11 | 122.0 (2) | C2—O1—C1 | 116.1 (2) |
| N2—C10—C15 | 119.2 (2) | C16—O4—C17 | 117.03 (19) |
| C11—C10—C15 | 118.8 (2) | ||
| O2—C2—C3—C4 | 179.2 (2) | C13—C14—C15—C16 | −179.4 (2) |
| O1—C2—C3—C4 | −0.7 (3) | N2—C10—C15—C14 | −177.6 (2) |
| O2—C2—C3—C8 | 0.1 (3) | C11—C10—C15—C14 | 0.3 (3) |
| O1—C2—C3—C8 | −179.83 (19) | N2—C10—C15—C16 | 2.0 (3) |
| C8—C3—C4—C5 | 0.3 (3) | C11—C10—C15—C16 | 179.9 (2) |
| C2—C3—C4—C5 | −178.9 (2) | C14—C15—C16—O5 | 178.9 (2) |
| C3—C4—C5—C6 | 0.5 (4) | C10—C15—C16—O5 | −0.8 (4) |
| C4—C5—C6—C7 | −0.9 (4) | C14—C15—C16—O4 | −0.5 (3) |
| C5—C6—C7—C8 | 0.4 (3) | C10—C15—C16—O4 | 179.9 (2) |
| C6—C7—C8—N3 | 177.4 (2) | O3—C9—N2—C10 | 15.1 (4) |
| C6—C7—C8—C3 | 0.4 (3) | N3—C9—N2—C10 | −164.8 (2) |
| C4—C3—C8—N3 | −177.8 (2) | C11—C10—N2—C9 | 6.1 (4) |
| C2—C3—C8—N3 | 1.4 (3) | C15—C10—N2—C9 | −176.1 (2) |
| C4—C3—C8—C7 | −0.8 (3) | O3—C9—N3—C8 | 11.5 (4) |
| C2—C3—C8—C7 | 178.4 (2) | N2—C9—N3—C8 | −168.6 (2) |
| N2—C10—C11—C12 | 177.0 (2) | C7—C8—N3—C9 | 16.1 (3) |
| C15—C10—C11—C12 | −0.9 (4) | C3—C8—N3—C9 | −167.0 (2) |
| C10—C11—C12—C13 | 1.0 (4) | O2—C2—O1—C1 | −1.7 (3) |
| C11—C12—C13—C14 | −0.5 (4) | C3—C2—O1—C1 | 178.3 (2) |
| C12—C13—C14—C15 | −0.2 (4) | O5—C16—O4—C17 | −0.2 (4) |
| C13—C14—C15—C10 | 0.2 (4) | C15—C16—O4—C17 | 179.1 (2) |
| H··· | ||||
| N2—H2 | 0.86 | 1.96 | 2.677 (3) | 140 |
| N3—H3 | 0.86 | 1.92 | 2.659 (3) | 144 |
| C6—H6···O3i | 0.93 | 2.57 | 3.442 (4) | 157 |
| C17—H17 | 0.96 | 2.46 | 3.176 (4) | 132 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| N2H2 | 0.86 | 1.96 | 2.677(3) | 140 |
| N3H3 | 0.86 | 1.92 | 2.659(3) | 144 |
| C6H6O3i | 0.93 | 2.57 | 3.442(4) | 157 |
| C17H17 | 0.96 | 2.46 | 3.176(4) | 132 |
Symmetry codes: (i) ; (ii) .