Literature DB >> 25995890

Crystal structure of di-chlorido-bis-(methyl isonicotinate-κN)copper(II).

Elaheh Ahadi1, Hassan Hosseini-Monfared1, Peter Mayer2.   

Abstract

In the title compound, [CuCl2(C7H7NO2)2], the square-planar-coordinated Cu(II) ion lies on a centre of symmetry and is bonded to two monodentate methyl-isonicotinate ligands through their N atoms and by two chloride ligands. The mol-ecules pack in a herringbone pattern. Perpendicular to [100] there are weak inter-molecular C-H⋯Cl and C-H⋯O contacts. Along [100] there are infinite chains of edge-sharing octa-hedra linked through the chlorido ligands.

Entities:  

Keywords:  crystal structure; methyl isonicotinate; square-planar copper(II) complex

Year:  2015        PMID: 25995890      PMCID: PMC4420097          DOI: 10.1107/S205698901500729X

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For related structures, see: Vitorica-Yrezabal et al. (2011 ▸); Laing & Carr (1971 ▸); Chen & Mak (2006 ▸); Ge et al. (2006 ▸); Chen et al. (2011 ▸); Ma et al. (2010 ▸). For background to isonicotinate, see: Zhou et al. (2006 ▸); Bera et al. (2001 ▸); Cotton et al. (2007 ▸); Tella et al. (2014 ▸). For the synthesis of 4-(5-phenyl-1,3,4-oxa­diazol-2-yl)pyridine, used in the preparation, see: Kangani & Day (2009 ▸).

Experimental

Crystal data

[CuCl2(C7H7NO2)2] M = 408.71 Monoclinic, a = 3.7792 (4) Å b = 29.891 (4) Å c = 7.0139 (8) Å β = 94.036 (10)° V = 790.36 (16) Å3 Z = 2 Mo Kα radiation μ = 1.74 mm−1 T = 173 K 0.50 × 0.05 × 0.04 mm

Data collection

Oxford Diffraction Xcalibur 3 diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2011 ▸) T min = 0.775, T max = 1.000 4265 measured reflections 1617 independent reflections 1404 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.091 S = 1.09 1617 reflections 107 parameters H-atom parameters constrained Δρmax = 0.53 e Å−3 Δρmin = −0.69 e Å−3

Data collection: CrysAlis PRO (Oxford Diffraction, 2011 ▸); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2008 ▸, 2015 ▸); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▸); software used to prepare material for publication: PLATON (Spek, 2009 ▸). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S205698901500729X/cq2014sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901500729X/cq2014Isup2.hkl Click here for additional data file. x y z . DOI: 10.1107/S205698901500729X/cq2014fig1.tif The mol­ecular structure of the title compound (ellipsoids drawn at the 30% probability level). Symmetry code: i = 1 − x, −y, 1 − z. Non-labelled non-hydrogen atoms have been generated by symmetry i. Click here for additional data file. . DOI: 10.1107/S205698901500729X/cq2014fig2.tif The unit cell viewed along [100] (ellipsoids drawn at the 50% probability level). Inter­molecular C—H⋯Cl and C—H⋯O contacts are indicated by dashed lines. Click here for additional data file. . DOI: 10.1107/S205698901500729X/cq2014fig3.tif Infinite strands along [100] formed by inter­molecular Cu—Cl bonds (thin bond diameter) (drawn at the 30% ellipsoid probability level). CCDC reference: 1059032 Additional supporting information: crystallographic information; 3D view; checkCIF report
[CuCl2(C7H7NO2)2]F(000) = 414
Mr = 408.71Dx = 1.717 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 3.7792 (4) ÅCell parameters from 1293 reflections
b = 29.891 (4) Åθ = 4.5–26.3°
c = 7.0139 (8) ŵ = 1.74 mm1
β = 94.036 (10)°T = 173 K
V = 790.36 (16) Å3Rod, green
Z = 20.50 × 0.05 × 0.04 mm
Oxford Diffraction Xcalibur 3 diffractometer1617 independent reflections
Radiation source: fine-focus sealed tube1404 reflections with I > 2σ(I)
Detector resolution: 15.9809 pixels mm-1Rint = 0.034
ω scansθmax = 26.4°, θmin = 4.5°
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2011)h = −4→4
Tmin = 0.775, Tmax = 1.000k = −33→37
4265 measured reflectionsl = −8→6
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.091w = 1/[σ2(Fo2) + (0.0388P)2 + 0.6044P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max < 0.001
1617 reflectionsΔρmax = 0.53 e Å3
107 parametersΔρmin = −0.69 e Å3
Experimental. Absorption correction: CrysAlisPro (Oxford Diffraction, 2011) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
Cu10.50000.00000.50000.01825 (17)
Cl10.91406 (17)0.03090 (2)0.71647 (9)0.01768 (18)
O20.3701 (7)0.17679 (8)−0.1593 (3)0.0414 (7)
O10.1672 (6)0.20909 (6)0.0994 (3)0.0291 (5)
N10.4707 (6)0.05771 (7)0.3486 (3)0.0168 (5)
C10.5365 (7)0.05831 (9)0.1633 (4)0.0180 (6)
H10.61720.03160.10700.022*
C20.4918 (7)0.09617 (9)0.0505 (4)0.0197 (6)
H20.54440.0955−0.08000.024*
C30.3693 (7)0.13491 (9)0.1308 (4)0.0174 (6)
C40.3076 (8)0.13494 (9)0.3240 (4)0.0188 (6)
H40.22780.16130.38370.023*
C50.3647 (8)0.09584 (9)0.4276 (4)0.0202 (6)
H50.32720.09610.56010.024*
C60.3063 (8)0.17503 (10)0.0051 (4)0.0236 (7)
C70.0886 (11)0.24908 (11)−0.0132 (5)0.0384 (9)
H7A0.30900.2613−0.05770.058*
H7B−0.02240.27140.06570.058*
H7C−0.07390.2416−0.12360.058*
U11U22U33U12U13U23
Cu10.0235 (3)0.0123 (3)0.0184 (3)−0.00169 (19)−0.0021 (2)0.00175 (18)
Cl10.0186 (3)0.0170 (4)0.0175 (3)−0.0002 (3)0.0016 (3)−0.0023 (2)
O20.0712 (19)0.0277 (13)0.0274 (13)0.0115 (12)0.0191 (13)0.0092 (10)
O10.0465 (14)0.0169 (11)0.0239 (12)0.0100 (10)0.0035 (10)0.0022 (9)
N10.0175 (12)0.0144 (12)0.0185 (12)0.0009 (9)0.0002 (9)−0.0003 (9)
C10.0201 (14)0.0150 (14)0.0192 (14)0.0007 (11)0.0038 (11)−0.0031 (11)
C20.0220 (15)0.0190 (15)0.0185 (14)−0.0010 (11)0.0048 (11)−0.0006 (11)
C30.0169 (14)0.0141 (14)0.0210 (14)−0.0016 (10)0.0003 (11)0.0010 (11)
C40.0212 (14)0.0146 (14)0.0211 (15)0.0005 (11)0.0043 (11)−0.0029 (11)
C50.0242 (15)0.0186 (14)0.0184 (14)−0.0006 (12)0.0049 (12)−0.0007 (11)
C60.0254 (16)0.0192 (16)0.0264 (17)0.0002 (12)0.0023 (13)0.0000 (12)
C70.056 (2)0.0217 (17)0.037 (2)0.0133 (16)0.0034 (17)0.0075 (14)
Cu1—N12.025 (2)C1—H10.9500
Cu1—N1i2.025 (2)C2—C31.382 (4)
Cu1—Cl12.2962 (7)C2—H20.9500
Cu1—Cl1i2.2962 (7)C3—C41.391 (4)
Cu1—Cl1ii2.9215 (7)C3—C61.498 (4)
Cu1—Cl1iii2.9215 (7)C4—C51.385 (4)
O2—C61.196 (4)C4—H40.9500
O1—C61.341 (3)C5—H50.9500
O1—C71.452 (4)C7—H7A0.9800
N1—C11.340 (4)C7—H7B0.9800
N1—C51.341 (3)C7—H7C0.9800
C1—C21.385 (4)
N1—Cu1—N1i180.00 (6)C3—C2—C1118.9 (3)
N1—Cu1—Cl190.79 (7)C3—C2—H2120.6
N1i—Cu1—Cl189.21 (7)C1—C2—H2120.6
N1—Cu1—Cl1i89.21 (7)C2—C3—C4118.8 (3)
N1i—Cu1—Cl1i90.79 (7)C2—C3—C6118.4 (3)
Cl1—Cu1—Cl1i180.0C4—C3—C6122.8 (3)
N1—Cu1—Cl1ii90.70 (7)C5—C4—C3118.7 (3)
N1i—Cu1—Cl1ii89.29 (7)C5—C4—H4120.7
Cl1—Cu1—Cl1ii87.97 (2)C3—C4—H4120.7
Cl1i—Cu1—Cl1ii92.03 (2)N1—C5—C4122.7 (3)
N1—Cu1—Cl1iii89.30 (7)N1—C5—H5118.6
N1i—Cu1—Cl1iii90.71 (7)C4—C5—H5118.6
Cl1—Cu1—Cl1iii92.03 (2)O2—C6—O1123.7 (3)
Cl1i—Cu1—Cl1iii87.97 (2)O2—C6—C3124.6 (3)
Cl1ii—Cu1—Cl1iii180.0O1—C6—C3111.7 (2)
C6—O1—C7115.4 (2)O1—C7—H7A109.5
C1—N1—C5118.1 (2)O1—C7—H7B109.5
C1—N1—Cu1120.86 (18)H7A—C7—H7B109.5
C5—N1—Cu1120.97 (19)O1—C7—H7C109.5
N1—C1—C2122.8 (3)H7A—C7—H7C109.5
N1—C1—H1118.6H7B—C7—H7C109.5
C2—C1—H1118.6
C5—N1—C1—C2−1.5 (4)Cu1—N1—C5—C4−173.5 (2)
Cu1—N1—C1—C2174.6 (2)C3—C4—C5—N1−1.3 (4)
N1—C1—C2—C3−1.0 (4)C7—O1—C6—O21.3 (5)
C1—C2—C3—C42.3 (4)C7—O1—C6—C3−178.5 (3)
C1—C2—C3—C6−177.2 (3)C2—C3—C6—O2−3.7 (5)
C2—C3—C4—C5−1.2 (4)C4—C3—C6—O2176.8 (3)
C6—C3—C4—C5178.3 (3)C2—C3—C6—O1176.1 (3)
C1—N1—C5—C42.7 (4)C4—C3—C6—O1−3.4 (4)
D—H···AD—HH···AD···AD—H···A
C2—H2···Cl1iv0.952.833.517 (3)130
C7—H7B···O2v0.982.533.470 (4)161
C7—H7C···O1vi0.982.583.298 (4)130
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C2H2Cl1i 0.952.833.517(3)130
C7H7BO2ii 0.982.533.470(4)161
C7H7CO1iii 0.982.583.298(4)130

Symmetry codes: (i) ; (ii) ; (iii) .

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